| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3262 |
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| Symbol | |
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| ID | 6410932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3509532 |
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| End bp | 3510755 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713138 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001992239 |
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| Protein GI | 192291634 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCTG TTCCTTTGAA AAACGCCGAG CGTGCCCATA GCGGCGTCCG CACCGTAAGC
GTGCTCGGCG CCACCGGTTC GATCGGCGAC AGCACGATGG ATTTGATCCG AGCCGAGCCT
GAGCGCTACC GGGTCGAGGC GTTGACCGGC AACGCCAACG TGGCCGGCCT CGCCAAACTC
GCCAAGGAGT TCAACGCCCG CTTCGTCGCC GTCGCCGATC CGGCCCGACT CGGCGAGTTG
CGCGCGGCGC TCGCCGGGAC CGACGTCGCC TGTGGTGCAG GCGAGAGCGC GGTGATCGAA
GCGGCGGCCC GGCCGGCCGA TTGGGTGATG GCCGCCATTT CGGGGGCGGC CGGTCTGAAG
CCGGCGCTGG CTGCGGTCGA CCGCGGCACC ACCGTGGCGC TCGCCAACAA AGAGTGCCTG
GTCTGCGCCG GCGACTTCTT CATGAGCCGG GCGACTGCTG CCGGGGCGCA GATCCTGCCG
GCGGATTCGG AGCACAACGC GCTGTTTCAG GCGCTGGCTT CCGGTAACCG CCATGAACTG
ACCCGGGTCA TCATCACGGC CTCGGGCGGT CCGTTCCGCA CCTGGGCTGC CGCCGACATC
GAGCAGGCCA CCCTGGCGCA GGCCCTGAAG CATCCGAACT GGAGCATGGG GCAGAAGATC
ACCATCGACT CGGCGTCGAT GATGAACAAG GGCCTCGAGG TGATCGAAGC CTCGTACCTG
TTCGCGCTGT CGCCCGACGA GATTGACGTG CTGGTGCATC CCCAGTCGAT CGTCCACGGC
TTGGTCGAGT TCGCCGACCG CTCGGTGGTC GCCCAGCTCG GCGCGCCCGA CATGCGGATT
CCGATCGCGC ATTGTCTCGG CTTCCCGGAT CGTATTACCG GACGTGCGGC CAAGCTCGAC
CTCGCCAAGA TTGGTCAGTT GACCTTCGAA GCACCTGATT TCACGCGTTT TCCCGGTTTG
CGGCTGGCCT ACGATGCGCT CCGCACCGGC AATGGTGCCA CGACCGTGTA TAACGCCGCC
AATGAGGTGG CGGTCGCGGC GTTCATCGCG CAGAAGATCC GGTTCGGGGC GATCGCGCGG
TTGGTCGAGG ACACGCTCAA CAGCTGGGTC CGCGCCGGCA ACCAGGCGCC GCTCGGCTCC
GCCGACGACG CCATCGCTCT CGACCAACAG GCGCGAAACC TCGCTGCCAC CCTATTGCCT
CAAATTGCCG CAAAGGCATC CTAG
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| Protein sequence | MSPVPLKNAE RAHSGVRTVS VLGATGSIGD STMDLIRAEP ERYRVEALTG NANVAGLAKL
AKEFNARFVA VADPARLGEL RAALAGTDVA CGAGESAVIE AAARPADWVM AAISGAAGLK
PALAAVDRGT TVALANKECL VCAGDFFMSR ATAAGAQILP ADSEHNALFQ ALASGNRHEL
TRVIITASGG PFRTWAAADI EQATLAQALK HPNWSMGQKI TIDSASMMNK GLEVIEASYL
FALSPDEIDV LVHPQSIVHG LVEFADRSVV AQLGAPDMRI PIAHCLGFPD RITGRAAKLD
LAKIGQLTFE APDFTRFPGL RLAYDALRTG NGATTVYNAA NEVAVAAFIA QKIRFGAIAR
LVEDTLNSWV RAGNQAPLGS ADDAIALDQQ ARNLAATLLP QIAAKAS
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