| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3261 |
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| Symbol | |
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| ID | 6410931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3508335 |
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| End bp | 3509486 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642713137 |
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| Product | membrane-associated zinc metalloprotease |
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| Protein accession | YP_001992238 |
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| Protein GI | 192291633 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGATC TTTTTCTGAA TAGTTTCCAC ACGTTGAGCC ACGGACTGGT CGGGTATGTG
GTGCCCTTCC TGTTCGTGCT GACCATCGTG GTGTTCTTCC ATGAACTCGG CCATTTCCTG
GTGGCGCGCT GGAACGGCGT GAAGGTTCTG ACCTTTTCGA TCGGCTTCGG TCCGGAGATT
GTCGGCTTTA ACGACCGCTA CGGCACCCGC TGGAAGCTGT CGGCCGTGCC GCTCGGCGGC
TACGTCAAGT TCTTCGGTGA CGACAGCGAG GCCAGCACGC CGTCCGGCGA CGCGTTGTCG
CAGATGTCGG CGTCCGAGCG GGCGGTCAGT TTCCACCACA AGCCGGTGGG GCCGCGCGCG
GCGATCGTGG TCGCCGGCCC GTTGGCCAAT TTCATCCTGG CGGTGGTGCT GTTCACCTTC
CTGTTCAGCG TGTTCGGAGT GCCGAATACC TCCGCGCGTG TCGACGGGGT TCAGCCCGGC
AGCGCCGCCG AAGCAGCGGG CTTCAAGCCG GGTGACGTCG TGACGTCGAT CAACGGCAGC
GCGATCAGCA ACTTCCTTGA GATGCAGCGT TTCGTCGGCG CCGAAGCCGG TAACCAGCTC
AAATTTACCG TTAAGCGCGG CGATTCGACC GTCGATCTGG TGGCGACGCC CCAGCTCAAG
GAGATCAAGG ATCGCTTCGG CAACGTCCAG CGGCTCGGCA TTCTGGGCAT CAGCCGCTCG
ACCGCGGCAG GCGAGGTGAC CACCGAGCAG GTCAATCCGG CGGTGGCGTT CTGGATGGGG
ATTAAGGAGA CGTGGTTCGT CGTCGACCGG ACGTTCTCCT ATATCGGCGG TATTTTCACC
GGCCGGGAAG CGGCTGACCA GCTCGGCGGC CCGCTGCGGA TTGCCCAGGT CTCAGGGCAG
GTGGCCACAA TCGGCTTTAC CCCGCTGCTG CATCTGGCGG CAGTGCTGTC GATCTCGATT
GGCCTTTTGA ACCTGTTCCC GGTTCCGTTG CTGGATGGCG GGCACCTGTT GTTCTATGGA
ATCGAAGCCG CCCGCGGCCG GCCGCTGTCG GAGCGGGCGC AGGAGCTGGG GTTCCGGATT
GGGCTGGCCT TGGTGCTGAT GTTGATGATG TTCGCGACCT ACAACGACAT TCTGCATCTG
GCGTCGTCGT GA
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| Protein sequence | MADLFLNSFH TLSHGLVGYV VPFLFVLTIV VFFHELGHFL VARWNGVKVL TFSIGFGPEI
VGFNDRYGTR WKLSAVPLGG YVKFFGDDSE ASTPSGDALS QMSASERAVS FHHKPVGPRA
AIVVAGPLAN FILAVVLFTF LFSVFGVPNT SARVDGVQPG SAAEAAGFKP GDVVTSINGS
AISNFLEMQR FVGAEAGNQL KFTVKRGDST VDLVATPQLK EIKDRFGNVQ RLGILGISRS
TAAGEVTTEQ VNPAVAFWMG IKETWFVVDR TFSYIGGIFT GREAADQLGG PLRIAQVSGQ
VATIGFTPLL HLAAVLSISI GLLNLFPVPL LDGGHLLFYG IEAARGRPLS ERAQELGFRI
GLALVLMLMM FATYNDILHL ASS
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