| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3253 |
|---|
| Symbol | gltA |
|---|
| ID | 6410923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 3498985 |
|---|
| End bp | 3500289 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642713129 |
|---|
| Product | type II citrate synthase |
|---|
| Protein accession | YP_001992230 |
|---|
| Protein GI | 192291625 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAA CGACCAACAA CAAAACGGCA ACGCTGACGG TTGGAAACAA GAACTTCGAT
CTTCCGGTGC TCACCGGGAC AGTCGGTCCC GACGTCATCG ACATCGGCAA GCTCTACGCG
CAGACCGGAA TGTTCACCTA CGATCCGGGC TTCACGTCAA CGGCGAGCTG CCAGTCCAAA
ATCACTTACA TCGACGGCGA CGCAGGCGTT CTCGAGTATC GCGGTTACCC GATTGAACAG
CTCGCCGAAA AAGGCGACTT CCTAGAAACT TGCTATCTCT TGCTGTACGG CGAATTGCCG
ACCAAGGCGC AGAAGGAAGA TTTCGACTAC CGCGTCACCC GGCACAACAT GGTTCACGAG
CAGATGGCCC GGTTCTTCCA GGGCTTCCGT CGTGACGCGC ATCCGATGGC GGTGATGGTG
GCTTCGGTCG GCGCGCTCGC CGCATTCTAC CACGACTCCA CCGACATTAA CGATCCGACC
CAGCGGATGG TCGCTTCGAT CCGGATGATC GCGAAGGTCC CGACGCTGGC CGCGATGGCC
TACAAGTACT CGGTGGGCCA GCCCTTCATC TATCCGAAGA ACACGCTCAG CTACGCAGCG
AACTTCCTGC GGATGTGCTT CGCGACTCCG TGCGAGGAGT ACGTCGTCAA TCCGGTGCTG
GCGAACGCGC TCGACAAGAT CTTCACGCTG CACGCCGACC ACGAGCAGAA CGCCTCGACC
TCGACCGTGC GCATCGCCGG CTCGTCGGGT GCCAATCCGT TCGCCTGTAT CGCGGCCGGT
ATCGCCTGCC TGTGGGGCCC GGCGCATGGC GGTGCGAACG AAGCGGCGCT GGCGATGCTG
AAGGAGATCG GCACCGTCGA GAACATCCCG GACTTCATCG CCAAGGTGAA GGACAAGAGC
TCGTCGGTAC GGCTGATGGG CTTCGGCCAC CGCGTCTATA AGAACTACGA TCCGCGCGCC
AAGATCATGC AGCAGGTCTG CCACGAAGTG CTGGCCGAAA CCGGCCATCA CGGCGACCCG
CTGCTCAAGG TGGCGATGGA GCTCGAGAAG ATCGCGCTCA GCGATCAGTA CTTCATTGAC
CGCAAGTTGT ACCCGAACGT CGACTTCTAT TCGGGCATCA CGCTGAAGGC GATGGGCTTC
CCGACAGACA TGTTCACCGT GCTGTTCGCG GTCGCCCGCA CTGTCGGCTG GATCAGCCAG
TGGAGCGAGA TGATCGAGGA CCCGCAGCAG AAGATCGGCC GTCCGCGCCA GCTCTTCACC
GGCGCGACCA CCCGCAACTA CGTCGAGATC GGCAAGCGCG GCTGA
|
|---|
| Protein sequence | MDATTNNKTA TLTVGNKNFD LPVLTGTVGP DVIDIGKLYA QTGMFTYDPG FTSTASCQSK
ITYIDGDAGV LEYRGYPIEQ LAEKGDFLET CYLLLYGELP TKAQKEDFDY RVTRHNMVHE
QMARFFQGFR RDAHPMAVMV ASVGALAAFY HDSTDINDPT QRMVASIRMI AKVPTLAAMA
YKYSVGQPFI YPKNTLSYAA NFLRMCFATP CEEYVVNPVL ANALDKIFTL HADHEQNAST
STVRIAGSSG ANPFACIAAG IACLWGPAHG GANEAALAML KEIGTVENIP DFIAKVKDKS
SSVRLMGFGH RVYKNYDPRA KIMQQVCHEV LAETGHHGDP LLKVAMELEK IALSDQYFID
RKLYPNVDFY SGITLKAMGF PTDMFTVLFA VARTVGWISQ WSEMIEDPQQ KIGRPRQLFT
GATTRNYVEI GKRG
|
|---|
| |