Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3241 |
Symbol | |
ID | 6410911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3486674 |
End bp | 3487174 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642713117 |
Product | heat shock protein Hsp20 |
Protein accession | YP_001992218 |
Protein GI | 192291613 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.406826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATGC GCGACATCAT CCCCTGGGGC CGGACCAATC AACCCGCAAC CCGCTCGTTC GAAGGCGACC CGTTCCTGTC GCTGCACCGC GAGATGAATC GGCTGTTCGA CGACGTATTT CGCGGCTTCG ATCTGCCGGC CCGTGCCGGC ACTCTGGCGC CGTTCAGCAC CGGCTGGCCG AAGCTCGAAA TCACCGATGG CGACAAGGAA CTGAAAATCG CCGCCGAAGT GCCGGGCCTC GAAGAGAAGG ACATCGAGGT CCTGCTCGAC GACGGTACAC TGACGATCCG TGGCGAGAAG ACGTCGTCGA CCGAAGCCAA GGACAAGCAG TTCAGCGAGC ACTTCTACGG CAAGTTCGAA CGCCGGATTC CGCTGGATGT CGCGGTCGCG GCCGATCAGG TCAGTGCCAG CTTCAAGAAC GGCGTCCTGA CGGTCACGCT GCCGAAGGCG GAACTGTCAC CCTCGACGGC GAAACGCATC GAGATCCAGA AGACGAACTA A
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Protein sequence | MNMRDIIPWG RTNQPATRSF EGDPFLSLHR EMNRLFDDVF RGFDLPARAG TLAPFSTGWP KLEITDGDKE LKIAAEVPGL EEKDIEVLLD DGTLTIRGEK TSSTEAKDKQ FSEHFYGKFE RRIPLDVAVA ADQVSASFKN GVLTVTLPKA ELSPSTAKRI EIQKTN
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