Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3236 |
Symbol | trpC |
ID | 6410906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3481897 |
End bp | 3482694 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642713112 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_001992213 |
Protein GI | 192291608 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCGACA TCCTGACCAA GATCGAAGCC TACAAGCGCG AGGAGATCGC GGCCGCCAAG CGCGAGCGCC CGCTTGCAGC GATCGAGGCG ATCGCCCGTG AAGCATCGCC GCCGCGCGGC TTCGTCAAGG CGCTGCGCGC CAAACATGCG GCCGGCGACT ACGGGCTGAT TGCCGAAATC AAGAAGGCCT CGCCGTCGAA GGGCCTGATC CGCGCCGACT TCGATCCGTC GGCGCTGGCC CGCGCCTATG AGGCCGGCGG CGCGGCATGC CTGTCGGTGC TGACCGATAC GCCGTCGTTC CAGGGCAGCC TCGATTATCT CGTCGCCGCG CGCGCGGCGG TGTCGCTGCC GGCGCTGCGC AAGGATTTCA TGTACGACAC CTATCAGGTG GTCGAAGCGC GCGCTCACGG CGCCGACTGC ATCCTGATCA TCATGGCGGC GCTCGATGAC GCCGAGGCCA AGGACATCGA GGACGCCGCG TTCGATCTCG GCATGGACGT GCTGCTCGAA GTGCACGATG CCCCCGAACT CGAGCGCGCG CTGAAGCTGC GGTCGCCGAT GGTCGGCGTC AACAATCGTA ATCTGCGTAC CTTCGAGGTG ACGCTGGCAA CCAGCGAGGC GCTGGCGCCG CTGATCCCGA AGGACCGCCT GATGGTCGGC GAGAGCGGCA TCTTCACGCC CGCCGATCTC GCCCGCCTCG CCCGCGTCGG CATGTCGACC TTCCTGGTCG GCGAAAGCCT GATGCGACAG CAGGACGTCG CCGCCGCCAC CCGCGCGCTG CTGGCGCGTG CGGCCTGA
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Protein sequence | MSDILTKIEA YKREEIAAAK RERPLAAIEA IAREASPPRG FVKALRAKHA AGDYGLIAEI KKASPSKGLI RADFDPSALA RAYEAGGAAC LSVLTDTPSF QGSLDYLVAA RAAVSLPALR KDFMYDTYQV VEARAHGADC ILIIMAALDD AEAKDIEDAA FDLGMDVLLE VHDAPELERA LKLRSPMVGV NNRNLRTFEV TLATSEALAP LIPKDRLMVG ESGIFTPADL ARLARVGMST FLVGESLMRQ QDVAAATRAL LARAA
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