Gene Rpal_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3236 
SymboltrpC 
ID6410906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3481897 
End bp3482694 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content68% 
IMG OID642713112 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_001992213 
Protein GI192291608 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGACA TCCTGACCAA GATCGAAGCC TACAAGCGCG AGGAGATCGC GGCCGCCAAG 
CGCGAGCGCC CGCTTGCAGC GATCGAGGCG ATCGCCCGTG AAGCATCGCC GCCGCGCGGC
TTCGTCAAGG CGCTGCGCGC CAAACATGCG GCCGGCGACT ACGGGCTGAT TGCCGAAATC
AAGAAGGCCT CGCCGTCGAA GGGCCTGATC CGCGCCGACT TCGATCCGTC GGCGCTGGCC
CGCGCCTATG AGGCCGGCGG CGCGGCATGC CTGTCGGTGC TGACCGATAC GCCGTCGTTC
CAGGGCAGCC TCGATTATCT CGTCGCCGCG CGCGCGGCGG TGTCGCTGCC GGCGCTGCGC
AAGGATTTCA TGTACGACAC CTATCAGGTG GTCGAAGCGC GCGCTCACGG CGCCGACTGC
ATCCTGATCA TCATGGCGGC GCTCGATGAC GCCGAGGCCA AGGACATCGA GGACGCCGCG
TTCGATCTCG GCATGGACGT GCTGCTCGAA GTGCACGATG CCCCCGAACT CGAGCGCGCG
CTGAAGCTGC GGTCGCCGAT GGTCGGCGTC AACAATCGTA ATCTGCGTAC CTTCGAGGTG
ACGCTGGCAA CCAGCGAGGC GCTGGCGCCG CTGATCCCGA AGGACCGCCT GATGGTCGGC
GAGAGCGGCA TCTTCACGCC CGCCGATCTC GCCCGCCTCG CCCGCGTCGG CATGTCGACC
TTCCTGGTCG GCGAAAGCCT GATGCGACAG CAGGACGTCG CCGCCGCCAC CCGCGCGCTG
CTGGCGCGTG CGGCCTGA
 
Protein sequence
MSDILTKIEA YKREEIAAAK RERPLAAIEA IAREASPPRG FVKALRAKHA AGDYGLIAEI 
KKASPSKGLI RADFDPSALA RAYEAGGAAC LSVLTDTPSF QGSLDYLVAA RAAVSLPALR
KDFMYDTYQV VEARAHGADC ILIIMAALDD AEAKDIEDAA FDLGMDVLLE VHDAPELERA
LKLRSPMVGV NNRNLRTFEV TLATSEALAP LIPKDRLMVG ESGIFTPADL ARLARVGMST
FLVGESLMRQ QDVAAATRAL LARAA