| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3223 |
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| Symbol | |
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| ID | 6410893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3470894 |
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| End bp | 3471757 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713099 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_001992200 |
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| Protein GI | 192291595 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.365491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACAAGA GCATTGCGCC CGCGACCAGC GTCGTGGCGG GCAACGTCAA ATTCGGCAAC
GCGTTGCCGC TGTCGGTGAT CGCCGGCCCG TGCCAACTCG AAAGCCGCGC GCACGCGCTG
GAAGTCGCCT CGGCGCTGAA GGAGATCGCG ACCCGGCTCG GCATCGGGCT CGTCTACAAG
ACCTCGTTCG ACAAGGCCAA CCGCACCAGC GCCGCCAGCG CGCGCGGTCT CGGCCTCGAC
GCCGCGCTGC CGATCTTCGC AGAGATCCGC GATCATCTCG GCCTGCCGGT GCTCACCGAC
GTGCACGAGA ACGAGCAATG TGCGCGCGCT GCCGAAGCGG TCGACATCCT GCAGATCCCG
GCGTTTCTGT GCCGGCAGAC CGATCTGCTG CTGGCCGCCG CGGCGACCGG CAGGATCGTC
AACGTCAAGA AGGGCCAGTT CCTGGCGCCG TGGGACATGG GCAATGTCGT GTCCAAGATC
ACCCACGCCG GCAACGCTAA GGTGCTGGTG ACCGAGCGCG GCGTATCGTT CGGCTACAAC
ACGCTGGTGT CGGATATGCG CGCGCTGCCG ATCATGGCCA AGACCACCGG CGCCCCGGTG
ATCTTCGACG CCACCCATTC GGTGCAGCAG CCCGGCGGCA AGGGGACCTC GTCCGGCGGT
GAGCGTGAAT ACGTGCCGGT GCTGGCGCGT GCGGCGGTTG CGGTCGGCGT TGCCGGCGTG
TTCATCGAGA CCCATCCCGA TCCGGATCAC GCGCCGTCGG ACGGGCCGAA TATGGTGCCG
CTGCGCGAGT TCGAAGCGCT GATCAAGACG CTGATGGAGT TCGACGCGCT CGCCAAGAAG
CGGTCCACGG TCGGGGCCGT TTAA
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| Protein sequence | MNKSIAPATS VVAGNVKFGN ALPLSVIAGP CQLESRAHAL EVASALKEIA TRLGIGLVYK
TSFDKANRTS AASARGLGLD AALPIFAEIR DHLGLPVLTD VHENEQCARA AEAVDILQIP
AFLCRQTDLL LAAAATGRIV NVKKGQFLAP WDMGNVVSKI THAGNAKVLV TERGVSFGYN
TLVSDMRALP IMAKTTGAPV IFDATHSVQQ PGGKGTSSGG EREYVPVLAR AAVAVGVAGV
FIETHPDPDH APSDGPNMVP LREFEALIKT LMEFDALAKK RSTVGAV
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