Gene Rpal_3213 details

Gene Information

• Locus tag: Rpal_3213
• ID: 6410883
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 3460453
• End bp: 3461067
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642713090
• Product: Lysine exporter protein (LYSE/YGGA)
• Protein accession: YP_001992191
• Protein GI: 192291586
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGACCG CCGATTTTCT CATCACCTCG CTGATCGTCG TCGCCTCGCC CGGAACCGGC 
GTGCTCTACA CCGTGGCTAC CGGACTGTCG CGCGGACCGC GGGCCAGCGC GATCGCGGCG 
TTCGGCTCGA CCATCGGCAT CGTGCCGCAT ATGGCGGCCG CGATCCTCGG CCTCGCCGCC 
CTGCTCCACA CCAGCGCGGT GGCGTTTCAG CTCTTCAAGT ATCTCGGCGT CGCTTATCTG 
CTGTACATGG CGTGGAAGAC GCTCGGCGAG CGCGGACCGC TCAGCGTCGA CAGTGACGTC 
GGGGCACCGT CAGCACTGCA GATGACAGTG ACCGGCGTAC TGATCAACAT CCTCAATCCG 
AAGCTGTCGA TCTTCTTCCT CGCCTTCCTG CCGCAATTCG TCTCCGCCGA TGATGCCCAT 
CCGCTCGGCC GCATGATCGA GCTCAGCGGC ATCTTCATGC TGATGACGTT CGTGGTGTTC 
ATGATCTACG GCTTGTTCGC TGCCTGGCTG CGCGACCATG TCATCACCCG ACCGCAAGTC 
ATGACCTGGC TCCGCCGCGG TTTCGCCGCA GCTTTTGTGG CGCTCGGCGC CAAGCTGGCG 
ACCGCGGAGC GCTGA 

 

Protein sequence

MVTADFLITS LIVVASPGTG VLYTVATGLS RGPRASAIAA FGSTIGIVPH MAAAILGLAA 
LLHTSAVAFQ LFKYLGVAYL LYMAWKTLGE RGPLSVDSDV GAPSALQMTV TGVLINILNP 
KLSIFFLAFL PQFVSADDAH PLGRMIELSG IFMLMTFVVF MIYGLFAAWL RDHVITRPQV 
MTWLRRGFAA AFVALGAKLA TAER