Gene Rpal_3209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3209 
Symbol 
ID6410879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp3456926 
End bp3457960 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content63% 
IMG OID642713086 
Productpyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 
Protein accessionYP_001992187 
Protein GI192291582 
COG category[C] Energy production and conversion 
COG ID[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 
TIGRFAM ID[TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.256858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCAC CCAAGAAGAG CGCCGCGAAG GAAACAACAC AGGACAAGGC CGGAGGAGCG 
TCACCATCGA ATGTGCCGCC TTTCACCAAG GAGCAGGAGC TCGGCGCTTT TCGTGAAATG 
CTGCTGATCC GCCGCTTCGA AGAGAAGGCC GGTCAGCTCT ACGGCATGGG TGCGATCGGC 
GGATTCTGCC ACCTCTACAT CGGCCAGGAA GCCGTCGTCG TCGGCATGCA GATGGCGCTT 
CGCGAAGGTG ATCAGGTGAT CACCGGCTAT CGCGATCACG GCCACATGCT CGCCTGCGGC 
ATGGACGCCA ACGGCGTGAT GGCCGAACTC ACCGGGCGCC GCGGCGGCTA CTCCAAAGGC 
AAGGGTGGCT CGATGCACAT GTTCAGCCGG GAGAAGAGCT TCTTCGGCGG ACACGGCATC 
GTCGGCGCGC AGGTCTCGCT CGGCACCGGC ATCGCCTTCG CAAACCGCTA TCGCGGCGAC 
GGACGCGTCT GCCTCGCTTA TTTCGGCGAC GGCGCCGCCA ATCAGGGCCA GGTGTACGAG 
AGTTTCAACA TGGCGGAGCT GTGGAAGCTC CCTGTGGTGT ATGTGATCGA GAACAACCGC 
TACGCGATGG GCACGTCGGT GACGCGTTCC TCGGCGCAGA CCGATTTCTC TAAGCGCGGT 
GTGTCGTTCA ATATTCCGGG CGAGCAGGTC GACGGTATGG ACGTGCGTGC GGTGAAGGCC 
GCCGGCGACA AGGCGGTTGC ACATTGCCGC GCCGGAAACG GCCCGTTCAT CCTCGAAATG 
CAGACCTATC GCTACCGCGG TCACTCGATG TCGGACCCGG CGAAATATCG GTCGCGCGAA 
GAAGTCGACA AGATCCGCAA CGATCAGGAT CCGATCGAGC AGGTGCGCAA GCGTCTGCTT 
GGGCTCGACA TGACCGAAGA CGATCTCAAG GCGATCGATG CCGAGGTCCG CAAGGTCGTC 
AACGAGTCCG CGGACTTCGC TCAGCACGAT CCCGAGCCCG ATCCGTCGGA GGTGTACACC 
GATGTGTATC GCTGA
 
Protein sequence
MAAPKKSAAK ETTQDKAGGA SPSNVPPFTK EQELGAFREM LLIRRFEEKA GQLYGMGAIG 
GFCHLYIGQE AVVVGMQMAL REGDQVITGY RDHGHMLACG MDANGVMAEL TGRRGGYSKG 
KGGSMHMFSR EKSFFGGHGI VGAQVSLGTG IAFANRYRGD GRVCLAYFGD GAANQGQVYE 
SFNMAELWKL PVVYVIENNR YAMGTSVTRS SAQTDFSKRG VSFNIPGEQV DGMDVRAVKA 
AGDKAVAHCR AGNGPFILEM QTYRYRGHSM SDPAKYRSRE EVDKIRNDQD PIEQVRKRLL 
GLDMTEDDLK AIDAEVRKVV NESADFAQHD PEPDPSEVYT DVYR