| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3206 |
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| Symbol | |
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| ID | 6410876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3453317 |
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| End bp | 3454723 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713083 |
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| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
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| Protein accession | YP_001992184 |
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| Protein GI | 192291579 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.267356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATCA ACATTCTGAT GCCCGCGCTG TCGCCGACCA TGGAGAAGGG CAACCTTGCG
AAGTGGCTGA AGAAGGAGGG CGACAAGGTC AAGAGCGGCG ACGTCATCGC CGAGATCGAG
ACCGACAAGG CGACGATGGA AGTCGAAGCC GCCGACGAGG GGACGCTCGC CAAGATCATC
GTGCCCGAAG GCACCCAGGA CGTGCCGGTC AACGACGTGA TCGCGGTGCT GGCTGCGGAC
GGCGAGGACG TCAAGGCCGC GGGGGCAGGC TGGAAGGCCA GTGCCGGCGG TGCCTCCTCA
CCCCAGCCCT CTCCCCAGAG GGAAGAGGGA GCCGGCCCCG CGGGCGGCAA GGCCGAGGCC
AATTCGCACA TACAGGACAA GGCTGACCAA AGGCCGACGC CACAGCCGCC TTCACCTCTC
CCTAACGGGG ACAGGTCGCC GCCGCAGGCG GCGGGTGAGG GGGCTCCAGC GCCGGCGAAT
GGCCGCGTGT TCGCTTCGCC CTTGGCGCGG CGGCTGGCGA AGGATGCCGG CATCGATATC
GCCCGGGTCA CCGGCACCGG ACCGCACGGC CGCGTCATTG CCCGCGACGT CGAGCAGGCC
AAGAGCGGTG GCGGCCTGAA GGCAGCGGCT GCGGCGCCTG CGGCCGGTCC CGCGATCGCG
CCGGCGATGT CGGATCAGCA GATCCGCGCG CTGTATCCGG AAGGCTCCTA TGAAGTCGTG
CCGCACGACG GCATGCGCCG GACCATTGCG CAAAGGTTGA CGCAGTCGAC CCAGACCATC
CCGCATTTCT ATCTGACGAT CGACTGCAAC CTCGATCGCC TGATGGCCGC GCGCGAGGAC
ATCAACGCCG CCGCGCCGAA GGACAAGGAC GGCAAGCCGG CCTACAAGCT GTCGGTCAAT
GACTTCATCA TCAAGGCGAT GGCGATCGCC CTGCAGCGTA TCCCCGACGC CAACGTATCA
TGGACCGAAG GCGGGATGTT GAAGCACAAG CATTCCGACA TCGGCGTTGC GGTGGCGATG
CCGGGCGGAC TGATCACGCC GATCATCCGC AGCGCCGAAA CTCAGTCGCT GTCGTCGATC
TCGGCGCAGA TGAAGGATTT TGCCGCACGT GCGCGGGCCC GCAAGCTGAA GCCTGAAGAG
TACCAGGGCG GCACCACCGC GGTGTCCAAT CTGGGGATGT TCGGAATCAA GGACTTCACC
GCCGTGATCA ACCCGCCGCA TGCTACGATC CTGGCGGTCG GCACCGGCGA GCAGCGCCCG
ATCGCCCGGG ACGGCAAGAT CGAGATCGCT ACCATGATGA GTGTGACGCT GAGTTGCGAT
CACCGCGCCG TCGACGGTGC GCTCGGCGCC GAACTGATCG GCGCCTTCAA GACGCTGATC
GAAAATCCCG TGATGATGAT GGTGTGA
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| Protein sequence | MPINILMPAL SPTMEKGNLA KWLKKEGDKV KSGDVIAEIE TDKATMEVEA ADEGTLAKII
VPEGTQDVPV NDVIAVLAAD GEDVKAAGAG WKASAGGASS PQPSPQREEG AGPAGGKAEA
NSHIQDKADQ RPTPQPPSPL PNGDRSPPQA AGEGAPAPAN GRVFASPLAR RLAKDAGIDI
ARVTGTGPHG RVIARDVEQA KSGGGLKAAA AAPAAGPAIA PAMSDQQIRA LYPEGSYEVV
PHDGMRRTIA QRLTQSTQTI PHFYLTIDCN LDRLMAARED INAAAPKDKD GKPAYKLSVN
DFIIKAMAIA LQRIPDANVS WTEGGMLKHK HSDIGVAVAM PGGLITPIIR SAETQSLSSI
SAQMKDFAAR ARARKLKPEE YQGGTTAVSN LGMFGIKDFT AVINPPHATI LAVGTGEQRP
IARDGKIEIA TMMSVTLSCD HRAVDGALGA ELIGAFKTLI ENPVMMMV
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