| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3205 |
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| Symbol | |
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| ID | 6410875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3451820 |
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| End bp | 3453241 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713082 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001992183 |
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| Protein GI | 192291578 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.169727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACA CCTCCTTCGA TGTCATCATC ATCGGTTCCG GCCCCGGCGG CTATGTCGCG
GCGATCCGGG CGGCGCAGCT CGGGTTCAAG ACCGCGATTG TCGAGAAGTC TTATCTCGGC
GGCATCTGCC TGAACTGGGG CTGCATCCCG ACCAAGGCGC TGCTGCGCTC GGCGGAAATC
TATCACTACA TGCAGCACGC CAAAGATTAC GGGCTGTCGG CCGATAACAT CTCGTTCGAT
CCGAAGGCGA TCGTGCAGCG CTCGCGGGGG GTGTCGAAGC GGCTGAACGA CGGCGTCGGC
TTCCTGATGA AGAAGAACAA GATCTCGATC ATCTGGGGCG CGGCGACGAT CGACGCGCCA
GGCAAGCTGG CGGTCGCTGC CTCCAAGACC GAGGCGCCGA AGGGCGCGCT GCCGCCGGGC
AGCTATCAGG CCAAGCATAT CATCGTCGCC ACCGGGGCAC GGCCGCGGGT GCTGCCAGGG
CTCGAGCCCG ACAAGAAGCT GGTCTGGACC TATTTCGAAG CGATGGTGCC GGAGACCATG
CCGAAGTCGC TGCTGGTGGT CGGCTCAGGG GCGATCGGCA TCGAGTTCGC CTCGTTCTTC
CACACCATGG GCGCCAAGGT CACCGTGGTC GAAGTGCTGC CGCAGATCTT GCCGGTCGAG
GACGCCGAGA TCGCAGCGCT CGCCCGCAAG CGGTTCGAGA AGCAGGGCAT CAAGATCCTG
ACCGGCGCCA AGGTCACCAA GCTCGACAAG AAGGCCGACA GCGTGGTTGC CACCATCGAT
CCCGGCAACG GCAAGCCAGA GACTGCGGAG TTCGACCGTG TGATCTCGGC GGTCGGCGTG
GTCGGCAATG TCGAAAACCT CGGCCTGGAC AAGCTCGGGG TGAAGCTCGA CCGCGGCACT
ATCGTCACCG ACGGGCTCGG CCGCACCAAC GTCCCCGGCC TCTATGCGAT CGGGGACGTC
GCCGGGCCGC CAATGCTGGC GCACAAGGCA GAGCACGAGG GGGTGATCTG TGTCGAGGCC
ATCAAGGGCC TGCATCCGCA TCCGCTCGAC AAGAGCCTGA TCCCCGGCTG CACCTACTGC
CAGCCGCAGG TCGCCTCCGT GGGCCTGACA GAGGCCAAGG CGAAGGAGCA GGGACGGGAG
ATCCGGGTCG GCCGCTTCCC GTTCACGGCC AACGGCAAGG CGATTGCGCT CGGCGAGGAC
CAGGGCCTGG TCAAGGTGAT CTTCGACAAG AAGACCGGGC AGCTCTTGGG TGCGCATATG
ATCGGCGCCG AAGTCACCGA GCTGATCCAG GGCTACGTGG TGGCGATGAA CCTCGAGACC
ACCGAGGAAG AACTGATGCA CACCGTCTTC CCGCACCCGA CACTGTCGGA GATGATGAAG
GAAGCCGTGC TCGACGCCTA CGGCAAGGTG CTCAACGCCT GA
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| Protein sequence | MSDTSFDVII IGSGPGGYVA AIRAAQLGFK TAIVEKSYLG GICLNWGCIP TKALLRSAEI
YHYMQHAKDY GLSADNISFD PKAIVQRSRG VSKRLNDGVG FLMKKNKISI IWGAATIDAP
GKLAVAASKT EAPKGALPPG SYQAKHIIVA TGARPRVLPG LEPDKKLVWT YFEAMVPETM
PKSLLVVGSG AIGIEFASFF HTMGAKVTVV EVLPQILPVE DAEIAALARK RFEKQGIKIL
TGAKVTKLDK KADSVVATID PGNGKPETAE FDRVISAVGV VGNVENLGLD KLGVKLDRGT
IVTDGLGRTN VPGLYAIGDV AGPPMLAHKA EHEGVICVEA IKGLHPHPLD KSLIPGCTYC
QPQVASVGLT EAKAKEQGRE IRVGRFPFTA NGKAIALGED QGLVKVIFDK KTGQLLGAHM
IGAEVTELIQ GYVVAMNLET TEEELMHTVF PHPTLSEMMK EAVLDAYGKV LNA
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