| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3203 |
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| Symbol | |
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| ID | 6410873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3450336 |
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| End bp | 3451157 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713080 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_001992181 |
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| Protein GI | 192291576 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.681346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGAATT TTAAGCGTAG CGTTTTTGCC GCGTTGCTGA TCGGCGCAGG AGCGAGCGCC
GTCCCGGCGG CTGCGTTCGA AGGCACCCCG GTTCGCCCGG AGGATACCGC GATCCCGGTT
GCCACCAGCC AGCCGGCCAC CGCGCCGGCG CTGAAGAAGG CGCTGCCGGC GGCGCCATCG
ACCACCTCGC TCACGGCCTT GCAGTATGCC GCCGAGGGCG GCCACCCGAT CGCGCAGTGG
CGGCTCGGGA AGATGTATGC CGATGGCAAC GGCGTCGACC AGGACGACCT GCGCGCCTTC
GACTATTTCA GCAAAATCGC CAATGCCCAC GCCGAGGACA GCCCGTCGGC GCCGCAGGCT
GCGATCGTCG CCAACGCCTT TGTGGCGCTC GGCCGCTACT ACCTCGACGG CATCCCGAAT
TCGAAGGTCA AGCGCGATCC GGAGCGGGCG CGCGAGATGT TCTCCTACGC CGCCTCGTAT
TTCGGCAATG CCGACGCGCA GTATGACCTG GCGCGGCTGT ACATCGACGG CGTCGGCGTG
CCGCGCGACT TCCGCTACGG CGCGCGCTGG CTTGGCCTCG CCGCCCAGAA GGGCCAGCAT
CAGGCCCAGG CCATGCTCGG CCAACTGCTG TTCAACGGCG AAAAACTGCC GCGCCAGGCC
GCTCGCGGCC TGATGTGGCT GACGCTGGCC CGCGATGCCG CGACGCCGGA AGAGGCCTGG
ATCAAGGACA GCTACAACAA GGCCTTCTCC AAGGCATCCG ACGACGACCG GGTGATGGCG
CTGCAGATGC TCGAGCACTG GGTCCAGGGC CGGCGGGACT GA
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| Protein sequence | MRNFKRSVFA ALLIGAGASA VPAAAFEGTP VRPEDTAIPV ATSQPATAPA LKKALPAAPS
TTSLTALQYA AEGGHPIAQW RLGKMYADGN GVDQDDLRAF DYFSKIANAH AEDSPSAPQA
AIVANAFVAL GRYYLDGIPN SKVKRDPERA REMFSYAASY FGNADAQYDL ARLYIDGVGV
PRDFRYGARW LGLAAQKGQH QAQAMLGQLL FNGEKLPRQA ARGLMWLTLA RDAATPEEAW
IKDSYNKAFS KASDDDRVMA LQMLEHWVQG RRD
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