Gene Rpal_3191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3191 
Symbol 
ID6410861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3437420 
End bp3438253 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content65% 
IMG OID642713068 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_001992169 
Protein GI192291564 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.762479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCTG AGATTCTGCA ATTCGAAACT GGCCGGCCTG TCGAGCAGCA GGCCGACCAG 
GACGAAGCGC TCGTCATCGA CGTCGAGGGC TATGAAGGCC CGCTCGACCT GCTGCTCACG
CTGGCGCGGC AGCAGAAGGT CGACCTGCAC AAGATCTCGA TCCTGGCGCT GGCCGATCAG
TATCTGCTGT TCATCGAAGA AGCGCGGAAG ATCCGGCTTG AACTCGCCGC CGACTATCTG
GTGATGGCGG CGTGGCTCGC CTTTCTGAAG TCGCGCCTGC TGTTGCCGGA GCCGCCGGCC
CAGGAAGGCC CGAGTGCCGA GGACATGGCG AATGCGCTGG CCAACCGGCT GCGCCGCCTC
GAAGCGATCC GCGAAGCCGC GAACCGGCTG ATGACCCGCG CCCAGCTCAA TCGCGACATC
TTCCCGCGCG GTCAGGTCGA AGAGATCGCC GAGATCAAGC ATCCGAAATT CACGGCGACG
CTGTACGACC TGCTGAGTGC CTACGCGTCG CAGCGTCAGT CGCGCGTGCT CACGACCGTG
CATCTCGCCA AGCGCACGGT GTGGTCGCTG AGCGAAGCGC GCGCGTCGCT GGAGCGCCTG
GTCGGGCTCG CCGAGGATTG GAGCCGGCTC GACGAATATC TGCTGCGCTA CATGCCCGAT
CCGACCCAGC GCGCCACCGT GCTGGCGTCG AGCTTCGCCG CCGCGCTCGA GCTGGTGCGC
GAAGGTGAAG TCGAGCTGCA TCAGTCGGGC CCCTTGGCGC CTTTGTATTT TCGTAAGCGT
CCGCCGTCTC CAGCGATGGA AGCGGCAGCC TTACCGGATA CTCCGGTCGG GTAG
 
Protein sequence
MTAEILQFET GRPVEQQADQ DEALVIDVEG YEGPLDLLLT LARQQKVDLH KISILALADQ 
YLLFIEEARK IRLELAADYL VMAAWLAFLK SRLLLPEPPA QEGPSAEDMA NALANRLRRL
EAIREAANRL MTRAQLNRDI FPRGQVEEIA EIKHPKFTAT LYDLLSAYAS QRQSRVLTTV
HLAKRTVWSL SEARASLERL VGLAEDWSRL DEYLLRYMPD PTQRATVLAS SFAAALELVR
EGEVELHQSG PLAPLYFRKR PPSPAMEAAA LPDTPVG