| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3187 |
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| Symbol | |
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| ID | 6410857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3434186 |
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| End bp | 3434995 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642713064 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001992165 |
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| Protein GI | 192291560 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.600412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCCG AGGATATCGA GGCCTCCAAG GCGCCGCTGA TGGACCACCT GATCGAGCTG
CGGTCGCGGC TGATCAAGGC GCTGCTCGGC TTCGGCATCG CGTTCATCTT CTGCTTCTTC
TTCGCCAAGC AGATCTACAA CGTGTTGGTG TGGCCGTTCG TCTGGGTCGC GGGGCCGGAG
AATTCGAAGT TCATCTACAC CGCGCTGCTC GAATACTTCC TCACCCAGCT CAAGCTGGCG
ATGTTCGGCG CCGGCTTCAT CTCGTTCCCG ATTATCGCCA CCCAGATCTA CAAATTCGTC
GCACCGGGAT TGTACAAGCA CGAGCGCAAC GCCTTCGTGC CGTATCTGAT CGCCACACCC
GGCTTCTTTC TGCTCGGCTC GCTGGTGGTG TACTTCCTGG TGCTGCCGAT GCTGGTGCGG
TTCTCGCTCG GCATGCAGCA GATGGGCGGC GCCGAGACCG CGCAGATACA GCTTCTGCCC
AAGGTCGGCG AATATCTGTC GCTGATGATG TCGCTGATCT TCGCGTTCGG CCTGGCATTT
CAGCTGCCGG TGATCCTGAC GCTGCTCGGC CGGATCGGCG TGCTGACCGC CAAGCAGCTC
AAGGAGAAGC GCCGCTACTT CATCGTCGGC GCCTTCATCA TCGCCGCGGT TCTGACCCCG
CCCGACGTGA TCAGCCAGGC CTCGCTCGCG ATCCCGCTGC TGCTGCTGTA CGAAGGCTCG
ATCATCGCTG TGTCGATCGT CGAAAAGAAG CGCGCCGCGG CAGACGCTAG CGCCAACGCC
AGCACCGACT CCTCGACACC GGCCGCCTAA
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| Protein sequence | MSAEDIEASK APLMDHLIEL RSRLIKALLG FGIAFIFCFF FAKQIYNVLV WPFVWVAGPE
NSKFIYTALL EYFLTQLKLA MFGAGFISFP IIATQIYKFV APGLYKHERN AFVPYLIATP
GFFLLGSLVV YFLVLPMLVR FSLGMQQMGG AETAQIQLLP KVGEYLSLMM SLIFAFGLAF
QLPVILTLLG RIGVLTAKQL KEKRRYFIVG AFIIAAVLTP PDVISQASLA IPLLLLYEGS
IIAVSIVEKK RAAADASANA STDSSTPAA
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