| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3175 |
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| Symbol | |
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| ID | 6410845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3420343 |
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| End bp | 3422043 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642713053 |
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| Product | hypothetical protein |
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| Protein accession | YP_001992154 |
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| Protein GI | 192291549 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.424838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCACTT CGATAATCTG TGTTTCCGCC GTGCTGGCGG TGAGTTGTGG CGCGGCGGAG
GCTGCGGATC TGTCGCGGGC GCCGGCGACC AAGGCGATCA CCGCTTGGAA TTGGACCGGC
TTCTATCTCG GCGGCCATCT CGGCGCCGGG TTTGGAACCG CCAAGGTTGA CAACCCGTTT
GGGCCGTCGA TTTACGGCGA CACCGTGCGC GCACCCAAAG CCCTGGCGGG CCTGCAGGCC
GGCTACAACT GGCAAGCCCA CGGCTCGCCC TGGGTGCTCG GCGTCGAAGT CGATGCGTCG
GCGATCGATG CCGACGGCAC CAACACCTGT CTGGCCTACT CCGGCCAGTT CGTCTCGGCG
AACTGCCGCG TCCGCGAGCA TGTGGTGGGC ACCCTCACCG GCCGGCTCGG CCACGCGTTC
GGCCCCGACG GCCGCTCGCT GATGTACGTC AAAGGCGGCG GCGCGTTTCT GTTCGGCAAC
TTCCGGATGA CGACCAACGC GCCCGACTAT CTCAATCAAC CTTCGGCCGA GCTCGACACC
ACACGCTGGG GCTGGACCGT GGGCGCGGGC ATCGAACACG CGCTGTCGTC ACGCTGGGCA
GTGCGAGCCG AATACGACTA CGCCAATTTC GGTCACCGCG GAATCGACGG TCCCGGCGGC
GGCTTTCTGC AAACGCCGTT CAACCCGAGG ACCTTGGTCG ACACCGCTGG AGCACCAACG
CAGGTCCGTC AGGACATGCA CCTGATCAAG CTCGGGCTGA ACTATTACTT CGGCCGCGGC
GACGGCGCAT TCGACTCGGT CGCGCGGCTA CCTGTGAAGG CGCCGGCCGG CACCTCGTGG
TCGGCCTGGC AGTTCGATGT CGGCGCGCGC TACTGGTACA GCCACGGCCG CTATCAGAAC
GACCTGACCC TGAACACCAT CAACGCCCAG CAGGAACATC TGGTGTCGCG GCTCACTTAC
GAGAGCGAAG GTCATTCCGG CGAAGTATTC TGGCGGATCG ACAGCCCACA GAAGCTGTTT
CTGAAGGGAT TTGCCGGCGG CGGCGGACTG GTGGCCGGCA AGATGAACGA CGAAGACTGG
TTCCCGACCG ATCCGCAAAA CGCCACGGCG TATTCCAACA CGGATCACAA CAAGGTCACC
GGCACCATCG CTTACGCGAC GCTGGATGTC GGCATCGATC TGTTCGGCGA CGCCTTCGGC
AAGCTCGGCG TGTTCGCCGG CTACAACTTC TATCGCGACC GCAAGGACGC GTTCAATTGC
CGCCAGATCG CGCTTGCTAT TCCCACGGCA TTCTGCGGAT CGTCGGAGGG AATCTCGATC
AGCCAGTACG AGGACTGGCA CTCGCTGCGG ATCGGCGCGA ACGGCACTCT GGCTGTAGCG
CCGAACACCA AGCTGCTGAT CGATGCCGCC TACCTGCCCT ACACACATAT TTCAGCGCTC
GATATCCACC ACGCTCGCAC CGATGTTGCG AGCAAGGACT CCCCTGCCTG GGGCACGGGC
CGCGGCGTTC AGCTCGAAGC GATCCTGACT TACGATATCA CGCCGACATT CAATGTCGGC
GTCGGCGGCC GCTACTGGGC GATGTGGGCG ACCGACGTCG AGACCGCGGG CTTCGGCAGT
CCGGTCCCGA CCCAGTTGCT GCCGATCCGG GTCGAACGCT ACGGCACCTT CGTGCAGGCG
TCGTACAAGT TCGATCGCTG A
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| Protein sequence | MRTSIICVSA VLAVSCGAAE AADLSRAPAT KAITAWNWTG FYLGGHLGAG FGTAKVDNPF
GPSIYGDTVR APKALAGLQA GYNWQAHGSP WVLGVEVDAS AIDADGTNTC LAYSGQFVSA
NCRVREHVVG TLTGRLGHAF GPDGRSLMYV KGGGAFLFGN FRMTTNAPDY LNQPSAELDT
TRWGWTVGAG IEHALSSRWA VRAEYDYANF GHRGIDGPGG GFLQTPFNPR TLVDTAGAPT
QVRQDMHLIK LGLNYYFGRG DGAFDSVARL PVKAPAGTSW SAWQFDVGAR YWYSHGRYQN
DLTLNTINAQ QEHLVSRLTY ESEGHSGEVF WRIDSPQKLF LKGFAGGGGL VAGKMNDEDW
FPTDPQNATA YSNTDHNKVT GTIAYATLDV GIDLFGDAFG KLGVFAGYNF YRDRKDAFNC
RQIALAIPTA FCGSSEGISI SQYEDWHSLR IGANGTLAVA PNTKLLIDAA YLPYTHISAL
DIHHARTDVA SKDSPAWGTG RGVQLEAILT YDITPTFNVG VGGRYWAMWA TDVETAGFGS
PVPTQLLPIR VERYGTFVQA SYKFDR
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