| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3170 |
|---|
| Symbol | |
|---|
| ID | 6410840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 3415220 |
|---|
| End bp | 3415603 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642713048 |
|---|
| Product | protein of unknown function DUF498 |
|---|
| Protein accession | YP_001992149 |
|---|
| Protein GI | 192291544 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3737] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0438826 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCAGC GCTCAGAGAT TCCTCATTTT CCGCGAACGG CCGCGATCGA TGCCTATGGC
AAAGGCGGAT TCTACTTCGC TGACATGTCG CATCAGGGAT CGCTGCTGTT CCTGCCGGAT
GCGGTGTGGG GCTGGGACGT GACCAAACCG GAGCAGATCG ACCGCTATAG CCTGCAGCGG
GTGTTCGATA ACGCCAACGC GATCGACACG CTGATCGTCG GCACCGGCGC CGACGTCTGG
ATCGCGCCGC GGCAGCTGCG TGAGGCACTG CGCGGCGTCA ATGTCGTACT CGACACCATG
CAGACCGGTC CTGCGATCCG GACCTACAAC ATCATGATCG GCGAGCGGCG GCGCGTTGCG
GCAGCGCTAA TTGCGGTGCC ATGA
|
|---|
| Protein sequence | MAQRSEIPHF PRTAAIDAYG KGGFYFADMS HQGSLLFLPD AVWGWDVTKP EQIDRYSLQR
VFDNANAIDT LIVGTGADVW IAPRQLREAL RGVNVVLDTM QTGPAIRTYN IMIGERRRVA
AALIAVP
|
|---|
| |