Gene Rpal_3167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3167 
Symbol 
ID6410837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3412596 
End bp3412748 
Gene Length153 bp 
Protein Length50 aa 
Translation table11 
GC content63% 
IMG OID642713045 
Productprotein of unknown function DUF1127 
Protein accessionYP_001992146 
Protein GI192291541 
COG category[S] Function unknown 
COG ID[COG5457] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.170768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTTT CGCTTATCCG CGCGATCCGC GCGTTCCGGG ACTATCAGCG CAACGTCGCT 
GAGCTGTCCC AGCTCAGCGA TCGCGAACTG GCCGACATCG GACTTGACCG TTCGGACATC
CCGCGCGTCG CTTCGGGTCA CTACAACGGC TGA
 
Protein sequence
MLLSLIRAIR AFRDYQRNVA ELSQLSDREL ADIGLDRSDI PRVASGHYNG