Gene Rpal_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3164 
Symbol 
ID6410834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3409716 
End bp3410123 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content64% 
IMG OID642713042 
Productthioesterase superfamily protein 
Protein accessionYP_001992143 
Protein GI192291538 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTTT CGCCGCCGCC GGGCTTTCAA CCATTTGCCG TTCAGGACGG CTATATCGGT 
ACCAACGGCC CGTATTACTG GCGGCAGAGC GGCGACGGCC AGCCGGAATT CGGCTTCCTC
AGTGACGACC GCCACGGCAA TCCCAACGGC GTGCTGCATG GAGGCGCGCT GCTCGGCTTC
CTCGATACCA TTCTGGGATT CTCGGTGGTG TTGGCCGGTC AGCGGCGCTG CGCCACGGTG
TCACTCGACA GCCGCTTCAT CGCCACCATC GAACCCGGCG GCTGGATCAC CGGCCGCACC
ACGATGAAGA AGCTGTCCCG GAGCCTTGCC TTCATCGACG CCGAAGCGCT CGCCGGCGAC
AAGCTGCTGG TGACGACCAG CGCGGTGTTC CGGATTTTCG AGTCGTAG
 
Protein sequence
MTVSPPPGFQ PFAVQDGYIG TNGPYYWRQS GDGQPEFGFL SDDRHGNPNG VLHGGALLGF 
LDTILGFSVV LAGQRRCATV SLDSRFIATI EPGGWITGRT TMKKLSRSLA FIDAEALAGD
KLLVTTSAVF RIFES