| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3152 |
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| Symbol | |
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| ID | 6410822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3397536 |
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| End bp | 3398831 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713030 |
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| Product | protein of unknown function DUF21 |
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| Protein accession | YP_001992131 |
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| Protein GI | 192291526 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTCGG TGGAATTGGC AATCGTTGTC GCCTTGATCG TCGTCAACGG TCTGCTGTCG
ATGTCCGAAC TGGCGATCGT CTCGTCACGC CCGGCGCGGC TGTCGATCCT GGCGCAGCGC
GGCGTCCGCG GCGCGCGCCA GGCGATGAAG CTGAGCGAAG ACCCCGGCCG GTTTCTCTCC
ACCGTCCAGA TCGGCATCAC CTTGGTCGGC GTGCTGTCCG GCGCGTTCTC CGGCGCGACG
CTGGGCCAGC GCCTGAGCGA CTGGCTGACA GCGTCCGGTG TGCCGTTCGC CGACATCATC
GGCTTCGGCC TGGTGGTGAC GCTGATCACC TACGCGACAC TGATCGTCGG CGAACTGGTG
CCGAAACAGC TGGCGCTGCG CGATCCCGAA GCGGTGGCGG TGAAGGTCGC GCCGGCGATG
GCGCTGCTCG CCAAGATCTC GCTGCCAGTC GTGGTCGTGC TCGACATCTC CGGCAAGGCG
ATGCTGGCGC TGCTTGGCCA GAGCGGCGAA CCTGAGGACA AAATCTCCGA AGAAGAAATC
CATAGCCTGG TGATGGAAGC CGAGACCGCC GGCATACTCG AGCCTGGTGA GCGCCAGATG
ATTGCAGGCG TGATGCGGCT CGGCGACCGC CCGGTCGGCG CGGTGATGAC GCCGCGTCCC
GAGGTCGACA TGATCGACCT GTCCGATCCG CCCGACCAGA TCCGCGCCAC TTTCGCGAGC
AGCCCGCATT CGCGGTTGCC GGCCACGGAT GGAGATCGCG ACGATCCGAT CGGCATTATC
CAATCCAAGG ACGTGCTCGA AGTCTATCTG CGCGGGGAGA CGCCGGACTT CCGGGCGCTG
GTGCGCGACG CGCCGGTGAT CCCGGCCTCC GCCGACGCGC GCGACGCACT AATCATGCTG
CGCAACGCCT CGGTCCATAT GGGGCTGGTG TACGACGAAT TCGGTGGCTT CGAAGGCGTG
GTCAGCACCG CCGATATTCT GGAGTCGATC GTCGGCGCGT TCAGCTCCGA AGACGGGCCG
CCGGAGCCCG CCGCAGTGCG CCGCGACGAC GGCTCGTACC TTGTCGCGGG GTGGATGCCG
GTCGACGAGT TCGGCGACCT GCTGGGCATG CCGGTGCCGG CGCAGCGCGA TTATCACACC
GTCGCCGGTC TGGTGCTGTC GCATCTCGGC GCGCTGCCGA GCGTCGGCGA CAAGTTCGAC
TTTCAGGACT GGCGGTTCGA GATCATGGAC CTTGATCACC GGCGGATCGA CAAGATCCTG
GCGAGCCGCC TGCCGGATGA CGAAGCCTCG CCATGA
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| Protein sequence | MLSVELAIVV ALIVVNGLLS MSELAIVSSR PARLSILAQR GVRGARQAMK LSEDPGRFLS
TVQIGITLVG VLSGAFSGAT LGQRLSDWLT ASGVPFADII GFGLVVTLIT YATLIVGELV
PKQLALRDPE AVAVKVAPAM ALLAKISLPV VVVLDISGKA MLALLGQSGE PEDKISEEEI
HSLVMEAETA GILEPGERQM IAGVMRLGDR PVGAVMTPRP EVDMIDLSDP PDQIRATFAS
SPHSRLPATD GDRDDPIGII QSKDVLEVYL RGETPDFRAL VRDAPVIPAS ADARDALIML
RNASVHMGLV YDEFGGFEGV VSTADILESI VGAFSSEDGP PEPAAVRRDD GSYLVAGWMP
VDEFGDLLGM PVPAQRDYHT VAGLVLSHLG ALPSVGDKFD FQDWRFEIMD LDHRRIDKIL
ASRLPDDEAS P
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