| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3135 |
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| Symbol | |
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| ID | 6410806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3381219 |
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| End bp | 3382523 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642713015 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_001992116 |
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| Protein GI | 192291511 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCCAT CCGTTGCGCC GCACGCTGTC CACACCATCG CAAACCCAGG CGTGAGCGCC
GCCGGCCTAG TCGCGGCTGA TCACGCTGTC GCGGCCGCGA TCGCCAATGA AGAAACCCGC
CAGCGCGACT CGATCGAGCT GATCGCCTCG GAGAATTTCG TCAGCCGGGC GGTCCTCGAT
GCGCAGGGAT CGGTACTGAC TAACAAATAT GCCGAAGGCT ATCCACATCG TCGCTACTAC
GGCGGTTGCG CGAATGTCGA CGCGATCGAG GATCTGGCGA TCGCCCGTGT CAATCAGCTG
TTCGGCAGCG CCTACGCCAA CGTCCAGCCG CATTCGGGAA GCCAAGCCAA TCAGGCGGTG
TTTCTCGCAC TGCTCGCACC CGGCGATACG ATCCTTGGCC TGGATTTGAA GGCCGGCGGC
CATCTGACCC ATGGGGCGCC GGTCAACATG TCCGGCCGCT GGTTCAAGGC CGTCAGCTAC
GGCGTCGACC CCGAGACTCA TCGCATCGAC ATGGATCAGG TGGCGGCACA GGCGCGCCAG
CATCGCCCAA GGCTGCTGAT TGCTGGCGGG TCGGCCTATC CGCGGATCAT CGATTTCGGC
CGCTTCCGCC AGATCGCCGA CGAGGTTGGA GCGATCCTGA TGGTCGACAT GGCCCACTTC
GCCGGGCTCG TGGCCGGAGG CGTTTATCCG TCGCCTGTTC CGTTTGCCGA TGTCGTTACC
TCGACGACGC ACAAGACGCT TCGTGGTCCG CGCGGCGGGT TCGTTCTGAC CAACGATGCG
AACATCGCCA AGAAGATCAA TTCAGCGACG TTCCCCGGGC TTCAGGGCGG CCCGCTGATG
CATGTGATTG CCGCGAAGGC CGTCGCTTTT GGCGAGGCGC TGCAACCGGA GTTCGGAGCC
TATGCGCAGG CCGTCGTCGA GAATTGCCGC GTGCTGGCGC AAGCGCTTGC GGATGGCGGG
CTGACGATCA CCTCGGGCGG CACCGATTGC CATCTCGCCG TCGTCGATCT GCGACCATTC
GGCGTGACCG GTAATATCGC CGAGCAGGCT TTGGAGTCGG TAGGGATCAC GCTCAACAAG
AACGCGATCC CGAACGATCC CGAGAAACCA ATGGTGACGT CGGGTATCCG TGTGGGAACG
GCTGCCGGCA CGTCCCGCGG CTTCGGCGCG GACCAGTATC GCGAGATTGC CGGGCTTGTC
CTCGAAACGC TCCACGCCGT CCGCGCCGGG ACGCTGGATG CAGAGCGGCA AGCGATCAAC
AAGCGCGTTC GGCGACTGGC CGCGAGCTTT CCGCTCCCTT ACTGA
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| Protein sequence | MGPSVAPHAV HTIANPGVSA AGLVAADHAV AAAIANEETR QRDSIELIAS ENFVSRAVLD
AQGSVLTNKY AEGYPHRRYY GGCANVDAIE DLAIARVNQL FGSAYANVQP HSGSQANQAV
FLALLAPGDT ILGLDLKAGG HLTHGAPVNM SGRWFKAVSY GVDPETHRID MDQVAAQARQ
HRPRLLIAGG SAYPRIIDFG RFRQIADEVG AILMVDMAHF AGLVAGGVYP SPVPFADVVT
STTHKTLRGP RGGFVLTNDA NIAKKINSAT FPGLQGGPLM HVIAAKAVAF GEALQPEFGA
YAQAVVENCR VLAQALADGG LTITSGGTDC HLAVVDLRPF GVTGNIAEQA LESVGITLNK
NAIPNDPEKP MVTSGIRVGT AAGTSRGFGA DQYREIAGLV LETLHAVRAG TLDAERQAIN
KRVRRLAASF PLPY
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