| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3130 |
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| Symbol | |
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| ID | 6410801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3377627 |
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| End bp | 3379261 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713010 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_001992111 |
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| Protein GI | 192291506 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAGCT GGACCGACCA TCTGATCATC CTGCCGATCC TGCTGCCGCT GTTCGTCGGC
GCAGTGATGC TGCTGATCGA CGAGCGCTAT CAGCAAATCA AGGCGTTCGC CAATCTCGCC
TCGATCGTGA TGATGGGCAT CATCGCGCTG CTCCTGATGC GCGCCGCAGA TGTCACGACC
GCGACCGGCA CGGCGCCGAT CGCGGTGTAC CGGCTCGGCG ACTGGCCGGC GCCATTCGCG
ATCGTGCTGG TGGCGGACCG GCTGTCGGCG CTGATGCTGG CGCTCACCAG CGTACTCGCC
TTCGCATCCA CGATCTTCGC GACGGCGCGT TGGCACCGGG TCGGCGCGCA TTTCCATTCG
CTGATGCAGT TTCTGCTGAT GGGTCTGAAC GGCGCCTTCC TGACCGGCGA CCTGTTCAAT
CTGTTCGTGT TCTTCGAACT GCTCCTGGCC GCGTCTTACG GCCTGGTGCT GCACGGCTCG
GGGCAGGCGC GGGTGCGGGC CGGGCTGCAA TACATCGCCA TCAACCTCAC CGCCTCGGTG
CTGTTCCTGA TCGGCGTCAG CCTGATCTAC GCCGTCACCG GCACGCTCAA TATGGCCGAT
CTGGCAATCC GCATTCCGCA GGTGCCGACG CAGGACCGAG CTCTGCTGGA AGCAGGTGCT
GCCATCCTCG GCGTCGCATT CATGGTCAAG GCCGGGATGT GGCCGCTGTG CTTCTGGCTG
CCGACGACCT ACGCGGCCGC GGCGGCGCCG GTCGCGGCCA TCTTCGCGAT CATGAGCAAG
GTCGGCATCT ACATCCTGCT GCGGCTGTCG CTGTTGTTCT TCGGCGCCGG CAGCGGCGCT
TCGGCGCTGT TCGGCAGCGA GTGGCTGGTC GCCGCCGGCA TCGCCACCAT CCTGTTCGGG
CTGATCGGCG CGCTGGCGTC GCAGGAAATC TCGCGGCTCG CCGGCTACGC CGTGCTGGTG
TCGTCAGGCA CGGTCCTGGC GGTCGCGGCC GCTGCTGGCA CGGCCGCCGT GACAGCCTCG
GCGCTGTTCT ATCTGGTCAG CTCGACGCTG GCGATTGCCG CGTTCTTCAT GCTGATCGAG
CTGCTCGAAC GCGGTCGCGA TCCCGGCGCC GACATGCTGG CGGTGACGCG CGAAGCCTAT
GGCGAGGACA TGCCGGACGA TCCAGACGCC GAGGAGGTCG GGATGGTGAT CCCGGCGTCG
ATGGCGATCC TCGGCTGGTG CTTCGTCGGC TGTGCGGCGG TGATCGCAGG CCTGCCGCCG
GTGTCTGGCT TCATCGCCAA ATTCTCGATG CTGACCGCCC TGCTCAGCGG CGACACCGGT
AGCAGCATCA CGCCGCTGCA CTGGACCCTG CTGGCGCTGC TGATGCTGTC GGGGCTGACG
ATGCTGATCG CCATGACCCG TGCCGGCATT CGCACGCTAT GGTCGCCGAC CGAACGCGCC
GATCCGCGGA TCCGGCTTGC GGAGATCGTT CCGATCGCAC TCCTGCTCCT CGGCTGCGCG
GCGATGACCG TGCAGCCGCA GGCCGCGATG ACCTACATGC AGGGCGCGGC GAAATCGTTG
CACACGCCAG CCGCCTATAT CGACAGCGTG CTGGCCCCGG CGCAGACGCG GGTGAAGCTC
GGAGGCGGCT CATGA
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| Protein sequence | MTSWTDHLII LPILLPLFVG AVMLLIDERY QQIKAFANLA SIVMMGIIAL LLMRAADVTT
ATGTAPIAVY RLGDWPAPFA IVLVADRLSA LMLALTSVLA FASTIFATAR WHRVGAHFHS
LMQFLLMGLN GAFLTGDLFN LFVFFELLLA ASYGLVLHGS GQARVRAGLQ YIAINLTASV
LFLIGVSLIY AVTGTLNMAD LAIRIPQVPT QDRALLEAGA AILGVAFMVK AGMWPLCFWL
PTTYAAAAAP VAAIFAIMSK VGIYILLRLS LLFFGAGSGA SALFGSEWLV AAGIATILFG
LIGALASQEI SRLAGYAVLV SSGTVLAVAA AAGTAAVTAS ALFYLVSSTL AIAAFFMLIE
LLERGRDPGA DMLAVTREAY GEDMPDDPDA EEVGMVIPAS MAILGWCFVG CAAVIAGLPP
VSGFIAKFSM LTALLSGDTG SSITPLHWTL LALLMLSGLT MLIAMTRAGI RTLWSPTERA
DPRIRLAEIV PIALLLLGCA AMTVQPQAAM TYMQGAAKSL HTPAAYIDSV LAPAQTRVKL
GGGS
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