| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3119 |
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| Symbol | |
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| ID | 6410790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3362955 |
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| End bp | 3364604 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712999 |
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| Product | acyl-CoA synthetase |
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| Protein accession | YP_001992100 |
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| Protein GI | 192291495 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.186561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCC CGCAAGGTCA CTACAGCATC GGTCTGGACA AGACCCCGGC CAACTTCGTG
CCGCTGTCGC CGCTGAGCTT CCTGGAGCGC ACCGCCAACG TTTATCCGGA AATGACCTCC
GTGGTGTACG AGGGGCGGCA CTACACCTGG AAAGAGACCC GCGCGCGCTG CCGCCGCTTC
GCCTCCTGGC TGACCCGCAG CGGCATCGGC CGCGGCGACA CCGTCGCGGT GATGCTGCCC
AACGTGCCGG CGATGGTCGA AGTGCATTTC GCGGTGCCGA TGGCCGGCGC GGTGCTGAAC
GCGCTCAACA TTCGGCTCGA TGCTGCGGCG ATCGCCTTCC AACTCGATCA CGGCGGCGCC
AAGATCATCC TGGTCGATCC GGAGTTCTCC AGCGTCGTCG CCGAGGCGCT GAAGCTGATG
ACCAAGCCGA AGCCGCTGGT GATCGACGTC GACGACAAGA TGTATCCCGG CAGCCACCGT
ATCGGCGAAC TGGAATACGA ATACGCCGTC GCGTCCGGCG ATCCGACCTT CGCCGGCCAT
CGCCCCGAGG AAGAGTGGGA CGCGATCTCG CTCGGCTACA CCTCCGGCAC CACCGGCAAT
CCGAAGGGCG TCGTCACGCA TCATCGCGGC GCGTATCTCA ACGCCGTCAG CAACATTCTC
GCCGGCAATC TCGGCCAGCA TCCGGTGTAT CTGTGGACGC TGCCGATGTT CCACTGCAAC
GGCTGGTGCT TCCCGTGGAC GCTCGCGGCC GCGGCCGGCA TCAACGTCTG CCTGCGCAAG
GTCGACCCGG CCAAGATCTT CGAACTGATC CCGAAGCACG GCGTCACTCA TATGTGCGGC
GCACCGATCG TCTACAACGC ACTGATCAAC GCACCTGAAG CGCCGAAGGG CGCTGCGACG
AAGCCCGTGG TCGGCCTGAT CGCCGGCGCC GCGCCGCCGA TGGCGGTGCT GGCCGGCGCC
GAGACCATCG GTATCAAGCT GACGCATGTG TACGGCCTGA CCGAAGTGTA CGGCCCCGCC
TCGGTCTGCG CCGAGCAGCC CGGTTGGGAC GAGCTGCCGG TCGCCGAGCG CGCCAAGCTG
AAGCGTCGCC AGGGCGTGCC CTACCCGATG CAGGAAGCCG TCACCGTGCT CAATCCTGAG
ACGATGCAGG AAGTGCCGCG CGACGGCGAG ACCATCGGCG AGGTGATGTT CCGCGGCAAT
ATCGTGATGA AGGGCTATCT AAAGAACGAG AAGGCCACCA AGGAAGCGCT CGCCGGCGGC
TGGTTTCACA CCGGCGACCT CGGCGTGCTC GATGCCGACG GCTACGTCAT CATCAAGGAC
CGCTCCAAGG ACATCATCAT CTCGGGCGGC GAGAACGTCT CGTCGGTCGA GGTCGAAGAC
GTGCTGTACA AGCACCCGGC GATCCTGTTC GCCGCCGTGG TCGCCAAACC TGATCCGAAA
TGGGGCGAAG TCCCCTGCGC CTTCGTCGAG CTGAAAGACG GCGCCAGCGC CACCGAAGCC
GAGATCATCG CCTATTGCCG CGAGCACCTG CCCGGCTTCA AGACCCCGAA GAGCATCGTG
TTCTCGGCCA TCCCCAAGAC TTCGACCGGC AAGATCCAGA AATTCATGCT GCGCGATCAG
GTGAAGTCGG CGAAGGCGAT TTTGGAGTAA
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| Protein sequence | MSTPQGHYSI GLDKTPANFV PLSPLSFLER TANVYPEMTS VVYEGRHYTW KETRARCRRF
ASWLTRSGIG RGDTVAVMLP NVPAMVEVHF AVPMAGAVLN ALNIRLDAAA IAFQLDHGGA
KIILVDPEFS SVVAEALKLM TKPKPLVIDV DDKMYPGSHR IGELEYEYAV ASGDPTFAGH
RPEEEWDAIS LGYTSGTTGN PKGVVTHHRG AYLNAVSNIL AGNLGQHPVY LWTLPMFHCN
GWCFPWTLAA AAGINVCLRK VDPAKIFELI PKHGVTHMCG APIVYNALIN APEAPKGAAT
KPVVGLIAGA APPMAVLAGA ETIGIKLTHV YGLTEVYGPA SVCAEQPGWD ELPVAERAKL
KRRQGVPYPM QEAVTVLNPE TMQEVPRDGE TIGEVMFRGN IVMKGYLKNE KATKEALAGG
WFHTGDLGVL DADGYVIIKD RSKDIIISGG ENVSSVEVED VLYKHPAILF AAVVAKPDPK
WGEVPCAFVE LKDGASATEA EIIAYCREHL PGFKTPKSIV FSAIPKTSTG KIQKFMLRDQ
VKSAKAILE
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