| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3116 |
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| Symbol | |
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| ID | 6410787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3359595 |
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| End bp | 3361139 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712996 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_001992097 |
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| Protein GI | 192291492 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0588014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCAGC GAAATTCATT CTACATCACC ACCGCGATCG CGTATCCCAA CGGCGCGCCG
CATATCGGCC ACGCCTATGA GGCGATTGCG ACCGACGCGC TGGCGCGGTT CCAGCGGCTC
GACGGCAAGG ACGTGTTCTT CCTGACCGGC ACCGACGAGC ACGGCCTGAA GATGATTCAG
ACCGCGCAGA AGGAAGGGCT GACGCCGCAC GCGCTCGCCA CCCGCAATGC CGGTCGCTTC
CGCGAGATGG ACGACCGGCT CGGCGTCTCC TACGACCGCT TCATCCGCAC CTCCGAGGAG
CAGCATCACC GCTCGGTCCA GGAAGTCTGG AAGCGGATGC AGGACAAGGG CGACATCTAC
CTCGACAGCT ATTCCGGCTG GTACTCGGTC CGCGACGAAG CCTACTACGC TGAAGACGAA
ACTGTCGTCG GCGAAGACAA GGTACGCCGC GGCCCGCAGG GTACGCCGGT CGAATGGGTC
GAAGAGAAGA GCTACTTCTT CAAGCTGTCC GCCTATCAGG ACAAGCTGCT CAAGCTGTAC
GAGGACCAGC CCGACTTCAT CGGCCCGGAC TCGCGCCGCA ACGAGGTGAT CAGCTTCGTC
AAGAGCGGAC TGAAGGATCT GTCGGTGTCG CGCACCACCT TCGACTGGGG CGTCAAGGTG
CCGGGCGATC CGGAGCACGT GATGTATGTC TGGGTCGACG CGCTGACCAA CTACATCAGC
GGCGTCGGCT TCCCCGACGA GAACGACGCC AACTGGCACT ACTGGCCGGC GGACGTGCAT
GTCATCGGCA AGGACATCAT CCGCTTCCAC GCGGTGTACT GGCCGGCGTT CCTGATGTCG
GCGGGCATCC CGGTGCAGAA GCGCGTTTAC GCCCACGGCT TCCTGTTCAA CAAGGGCGAG
AAGATGTCGA AGTCGGTCGG CAACATCGTC GACCCCTTCA ATCTTGCCGA CCAGTACGGC
GTCGATCAGG TGCGCTACTT CTTCCTGCGC GAGGTGCCGT TCGGCTCCGA CGGCAGCTAC
AATCACGAGG CGATCGTCAA CCGCATCAAC GCCGACCTCG CCAATGACCT CGGCAACCTG
GCGCAGCGCT CGCTGACCAT GGTGGCCAAG CAGTGCGAAG GCAAAGTGCC GGAGCATGGC
GCGTTCAGCG AGAACGATAG CGCGATCCTG GCGATGGCCG ACGGCATGAT CGCGCAGGCG
CGGACCGCGA TGGCGACGCA GCAGATCCAT CAGGCGCTGA ACGCGGTGTG GGCGGTGGTG
GCGGAAGCCA ACCGTTACTT CGCCGGCGAA GCACCGTGGG CGCTCGCCAA GACCGATCCG
GCGCGACAGA AGACGGTGCT CTACGTCACC GCCGAAGTTC TGCGGCAGAT CGCGATCCTG
GCCCAGCCAG CGATCCCGAC CGCGGCGGCC AAGCTGCTCG ACATCCTCGG CATCGCCGAG
GGGCAGCGCG ACTTCGCGGC GCTAGCGACC CGGATCGTGC CGGGTACACC GCTGCCTGCG
CCGGCCCCGA TCTTCCCGCG CTACGTCGAA CCGGCGACCG CGTAA
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| Protein sequence | MAQRNSFYIT TAIAYPNGAP HIGHAYEAIA TDALARFQRL DGKDVFFLTG TDEHGLKMIQ
TAQKEGLTPH ALATRNAGRF REMDDRLGVS YDRFIRTSEE QHHRSVQEVW KRMQDKGDIY
LDSYSGWYSV RDEAYYAEDE TVVGEDKVRR GPQGTPVEWV EEKSYFFKLS AYQDKLLKLY
EDQPDFIGPD SRRNEVISFV KSGLKDLSVS RTTFDWGVKV PGDPEHVMYV WVDALTNYIS
GVGFPDENDA NWHYWPADVH VIGKDIIRFH AVYWPAFLMS AGIPVQKRVY AHGFLFNKGE
KMSKSVGNIV DPFNLADQYG VDQVRYFFLR EVPFGSDGSY NHEAIVNRIN ADLANDLGNL
AQRSLTMVAK QCEGKVPEHG AFSENDSAIL AMADGMIAQA RTAMATQQIH QALNAVWAVV
AEANRYFAGE APWALAKTDP ARQKTVLYVT AEVLRQIAIL AQPAIPTAAA KLLDILGIAE
GQRDFAALAT RIVPGTPLPA PAPIFPRYVE PATA
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