| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3115 |
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| Symbol | |
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| ID | 6410786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3358459 |
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| End bp | 3359514 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642712995 |
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| Product | DNA polymerase III subunit delta' |
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| Protein accession | YP_001992096 |
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| Protein GI | 192291491 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0432076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGC GCAAGGCGAG CTCGAAGGCG GCGGCGCCGG AAAGCACTAT CCGGCATCCG
CGCGAGACCA CGGAGCTGTA CGGCCACCAC GCCGCCGAGC AGGCATTGCT CGACGCCTAT
CGCGGCGGCC GGATTGCCCA TGCCTGGCTG ATCGGCGGCG CGCAGGGGAT CGGCAAGGCT
ACGCTGGCGT ACCGTATGGC GCGGTTCGTA CTGACGCATC GCGAGCCGCA ATCGGACGCA
GTGCAGAGCG CGGCCTCGCT GGCGATCGAC CCCGATCATC CGGTGGCGCG GCATATCGCG
GCCGAGGCGC ATGGCGGCCT GCTGACGCTG GAGCGCTCGG TCAACGACAA GGGCGTGCTG
CGCAACGTCA TCACCGTCGA TGAATCGCGC GAGACGATTT CGTTCTTCGG CGCTACTGCG
GCGATCGACG GCTGGCGGGT GTGCATCGTC GACACGGTCG ACGACCTCAA CGCCAACTCG
GCCAATGCGC TGCTCAAGGT GATCGAGGAG CCGCCGCAGC GCTCGCTGTT CCTTTTGCTG
TCGAACGCGC CGGCACGGGT GCTGCCGACC ATCCAGTCGC GCTGCCGCAA GCTGATGCTG
CGGCCGCTCG CGACCGCCGA TGTCATCGCG GCCGCGGCGG ATGCGGCCGG TGTCGAGCGC
GATGATCCGC AGCTCGGCGA AGCGGCCGCC GCGTCCGAAG GCAGCGTCGC CCGCGCGCTG
ATGCTGATGG GCGGCGGCGC ATTGACGCTG CAGCAGACCA CGACCGCGTT GCTCGACAGC
CTGCCCAATG TCGATCCACG CGCCCTGCAT GCGCTCGGCG ATGCGATCGG CGGCACCGAC
CGCGCGACCT TGGCTGCGTT CGTCGATGGT GTCGACCGCT GGGTCGCGGC GCGGCTGCGC
ACGCCGGACC CGAACGCGGA ACTGCCGCGC CTTGCACGGC TGGCGGAGGT ATGGGAAAAG
ATCGGCCGCG CCGCACGCGA CACCGAAGCC TATAATCTCG AGCGCAAGCC GCTGGTATTT
TCGGTGTTCG GGCTTCTCGC GGAGGCGGTG CGCTGA
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| Protein sequence | MSTRKASSKA AAPESTIRHP RETTELYGHH AAEQALLDAY RGGRIAHAWL IGGAQGIGKA
TLAYRMARFV LTHREPQSDA VQSAASLAID PDHPVARHIA AEAHGGLLTL ERSVNDKGVL
RNVITVDESR ETISFFGATA AIDGWRVCIV DTVDDLNANS ANALLKVIEE PPQRSLFLLL
SNAPARVLPT IQSRCRKLML RPLATADVIA AAADAAGVER DDPQLGEAAA ASEGSVARAL
MLMGGGALTL QQTTTALLDS LPNVDPRALH ALGDAIGGTD RATLAAFVDG VDRWVAARLR
TPDPNAELPR LARLAEVWEK IGRAARDTEA YNLERKPLVF SVFGLLAEAV R
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