Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3110 |
Symbol | |
ID | 6410781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3353045 |
End bp | 3354196 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642712990 |
Product | protein of unknown function UPF0118 |
Protein accession | YP_001992091 |
Protein GI | 192291486 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCCA CCCTTCCCGA TCGCGCCCCG TCCCGCACTG ATCTCGCCTG GGCGATCGCC CTCGGGGGCA TTGCAACCGT GTCGTTCGCT GCGCTGCTCT ATGCCGCGTG GCAGTTCGCC GGCACGCTGT TCCTGATCTT CGCCGGCGTA TTGTTCGGTG TCTTCCTCAA TGCTCTGACC GAGCTCACAG GCAAGCTGGT CGGCGGGCCG CATGGCCTGC GGCTGGCGCT GATCTGTCTG GTTCTCACCG GCCTGACGAT CGGCGTGGCG TTCCTCGGCG GCAACACCAT CAGCCAGCAG GCCAAGGCTC TGTCCGGCAC GATCAAGACG CAGATCGTCA ATGTGAAGGC GTTGCTCGAG CGCAACGGCG TCGACACCGG TTTCCTCGAG CTCAATCCCA CCCCGAGCGC AGCGCATCCC GAAACGACAA CGCCCGTTCA GCCGCGCAAC CTGCCGAGCG CCGGCGAGAT CGCTTCCGGG GGCGGCGCGA TCGTCAGCCA GACGCTGAAG CTGATCCTCG GCACCATCGG CGCCGTCGGC AACTTCTTCA TCGTGATGTT TCTCGGCCTC GCCTTCGCGG CGCAGCCATC GGTGTACCGC AACGGATTGG TGCGGATGGT GCCGCGGCGC TACCGGGTGC AAGCCGACGT CATCGTCACC GACACCGGCG AGATGCTGAA GCGCTGGCTG TTGGCGCAGC TGATCACCAT GATGGCGGTG TTCGCCGTGA CCGCGACCGG TCTGTCGTTG ATCGGAATTC CTGGAGCATT CATCCTCGGC ATCCAGGCCG GCCTGCTCGC CTTCATCCCC ACGGTGGGAG CAATCCTTGG CGGGCTGATC ATCGTGCTCG CCGCGATCGG CTCCGGCTGG ATCGCCGTGG TCAGCGCCTT CGTGCTTTTC CTTGGCGTCC ACGCGCTCGA AAGCTACATC CTGACGCCGC TTATCCAGCG TCAGGCGATC GACATCCCGC CCGCAACGCT GTTCGCGATG CAGATCCTGC TCGGCATCGT GTTCGGGCTG TGGGGGCTGG CGCTGGCGCT GCCGTTGATG GCGATCGGCC GGGTCGTGCT CGACCATCTG CGCGGCGAGG AGCCGGCCGA GCTGATCTCG CCCGCCGGCA CCGCGCCGCT CGCGATTACG TCTGAGACGT AA
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Protein sequence | MTATLPDRAP SRTDLAWAIA LGGIATVSFA ALLYAAWQFA GTLFLIFAGV LFGVFLNALT ELTGKLVGGP HGLRLALICL VLTGLTIGVA FLGGNTISQQ AKALSGTIKT QIVNVKALLE RNGVDTGFLE LNPTPSAAHP ETTTPVQPRN LPSAGEIASG GGAIVSQTLK LILGTIGAVG NFFIVMFLGL AFAAQPSVYR NGLVRMVPRR YRVQADVIVT DTGEMLKRWL LAQLITMMAV FAVTATGLSL IGIPGAFILG IQAGLLAFIP TVGAILGGLI IVLAAIGSGW IAVVSAFVLF LGVHALESYI LTPLIQRQAI DIPPATLFAM QILLGIVFGL WGLALALPLM AIGRVVLDHL RGEEPAELIS PAGTAPLAIT SET
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