Gene Rpal_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3110 
Symbol 
ID6410781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3353045 
End bp3354196 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content66% 
IMG OID642712990 
Productprotein of unknown function UPF0118 
Protein accessionYP_001992091 
Protein GI192291486 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCCA CCCTTCCCGA TCGCGCCCCG TCCCGCACTG ATCTCGCCTG GGCGATCGCC 
CTCGGGGGCA TTGCAACCGT GTCGTTCGCT GCGCTGCTCT ATGCCGCGTG GCAGTTCGCC
GGCACGCTGT TCCTGATCTT CGCCGGCGTA TTGTTCGGTG TCTTCCTCAA TGCTCTGACC
GAGCTCACAG GCAAGCTGGT CGGCGGGCCG CATGGCCTGC GGCTGGCGCT GATCTGTCTG
GTTCTCACCG GCCTGACGAT CGGCGTGGCG TTCCTCGGCG GCAACACCAT CAGCCAGCAG
GCCAAGGCTC TGTCCGGCAC GATCAAGACG CAGATCGTCA ATGTGAAGGC GTTGCTCGAG
CGCAACGGCG TCGACACCGG TTTCCTCGAG CTCAATCCCA CCCCGAGCGC AGCGCATCCC
GAAACGACAA CGCCCGTTCA GCCGCGCAAC CTGCCGAGCG CCGGCGAGAT CGCTTCCGGG
GGCGGCGCGA TCGTCAGCCA GACGCTGAAG CTGATCCTCG GCACCATCGG CGCCGTCGGC
AACTTCTTCA TCGTGATGTT TCTCGGCCTC GCCTTCGCGG CGCAGCCATC GGTGTACCGC
AACGGATTGG TGCGGATGGT GCCGCGGCGC TACCGGGTGC AAGCCGACGT CATCGTCACC
GACACCGGCG AGATGCTGAA GCGCTGGCTG TTGGCGCAGC TGATCACCAT GATGGCGGTG
TTCGCCGTGA CCGCGACCGG TCTGTCGTTG ATCGGAATTC CTGGAGCATT CATCCTCGGC
ATCCAGGCCG GCCTGCTCGC CTTCATCCCC ACGGTGGGAG CAATCCTTGG CGGGCTGATC
ATCGTGCTCG CCGCGATCGG CTCCGGCTGG ATCGCCGTGG TCAGCGCCTT CGTGCTTTTC
CTTGGCGTCC ACGCGCTCGA AAGCTACATC CTGACGCCGC TTATCCAGCG TCAGGCGATC
GACATCCCGC CCGCAACGCT GTTCGCGATG CAGATCCTGC TCGGCATCGT GTTCGGGCTG
TGGGGGCTGG CGCTGGCGCT GCCGTTGATG GCGATCGGCC GGGTCGTGCT CGACCATCTG
CGCGGCGAGG AGCCGGCCGA GCTGATCTCG CCCGCCGGCA CCGCGCCGCT CGCGATTACG
TCTGAGACGT AA
 
Protein sequence
MTATLPDRAP SRTDLAWAIA LGGIATVSFA ALLYAAWQFA GTLFLIFAGV LFGVFLNALT 
ELTGKLVGGP HGLRLALICL VLTGLTIGVA FLGGNTISQQ AKALSGTIKT QIVNVKALLE
RNGVDTGFLE LNPTPSAAHP ETTTPVQPRN LPSAGEIASG GGAIVSQTLK LILGTIGAVG
NFFIVMFLGL AFAAQPSVYR NGLVRMVPRR YRVQADVIVT DTGEMLKRWL LAQLITMMAV
FAVTATGLSL IGIPGAFILG IQAGLLAFIP TVGAILGGLI IVLAAIGSGW IAVVSAFVLF
LGVHALESYI LTPLIQRQAI DIPPATLFAM QILLGIVFGL WGLALALPLM AIGRVVLDHL
RGEEPAELIS PAGTAPLAIT SET