Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3107 |
Symbol | rpsI |
ID | 6410778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3350688 |
End bp | 3351170 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642712987 |
Product | 30S ribosomal protein S9 |
Protein accession | YP_001992088 |
Protein GI | 192291483 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0103] Ribosomal protein S9 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.966484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGAGA CCATGCAGTC TCTCGACCAG CTCGCCGCGC TGAAGACCAC CGTCACTGGT GCGGACGCGC CGACCTACAC CAAGAAGGTC GACAAGTTCG GTCGCGCCTA CGCCACCGGC AAGCGCAAGG ACGCGGTCGC CCGCGTCTGG ATCAAGCCGG GCGCCGGCAA GATCACCGTC AACAGCCGTG AGGTCGAAAC CTATTTCGCC CGTCCGGTGC TGCGCATGAT GATCCAGCAG CCGCTGGTCG CCGCGGCCCG TGCCGGCCAG TACGACGTGA TCTGCACCGT CGCCGGCGGC GGTCTGTCCG GCCAGGCCGG TGCAGTTCGT CACGGCATCT CCAAGGCGCT CACCAATTTC GAGCCGGAGC TGCGCAGCGT GCTGAAGAAG GGTGGCTTCC TGACCCGCGA CAGCCGCGTC GTCGAGCGTA AGAAGTACGG CAAGGCCAAG GCCCGCCGCT CCTTCCAGTT CTCGAAGCGC TAA
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Protein sequence | MSETMQSLDQ LAALKTTVTG ADAPTYTKKV DKFGRAYATG KRKDAVARVW IKPGAGKITV NSREVETYFA RPVLRMMIQQ PLVAAARAGQ YDVICTVAGG GLSGQAGAVR HGISKALTNF EPELRSVLKK GGFLTRDSRV VERKKYGKAK ARRSFQFSKR
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