Gene Rpal_3105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3105 
Symbol 
ID6410776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3349638 
End bp3350066 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content64% 
IMG OID642712985 
Productthioesterase superfamily protein 
Protein accessionYP_001992086 
Protein GI192291481 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.886313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACATG CGAGGATGGG CGTAGGCGAA CTCGAAGAAT TTCTGCAGCG CGAGTTCCCG 
CAGGCGTTCA GCCACGGTGA CATTTCGATC GAGACCGCCG ATGGTCGCAC ATCTTTATTG
CGGCAGCGCT ACAGCGACCG GATGCTGCGC CCGGGCGGCA CCGTTTCGGG CCCGACCCTG
ATGGCGCTGG CGGATTTCGC CATGTACGTC GTGCTGCTGT CGGCGATCGG ACCGGTCGCG
CTCGCCGTCA CCACCAATCT CAACATCAAC TTCTTGCGGA AGGGCCAGCC CGGCCAGGAC
GTGGTCGCGG TCGCCAAGCT TTTGAAGCTC GGCCGGCGGC TGGCGGTCGG GGAGGTGACG
CTGCTGTCCG GCACCTCGCC GGATCCGATC GCTCACGTGA CGTCGACCTA TTCCATTCCA
GTCGCTTGA
 
Protein sequence
MTHARMGVGE LEEFLQREFP QAFSHGDISI ETADGRTSLL RQRYSDRMLR PGGTVSGPTL 
MALADFAMYV VLLSAIGPVA LAVTTNLNIN FLRKGQPGQD VVAVAKLLKL GRRLAVGEVT
LLSGTSPDPI AHVTSTYSIP VA