Gene Rpal_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3104 
Symbol 
ID6410775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3348720 
End bp3349547 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content66% 
IMG OID642712984 
Productenoyl-CoA hydratase 
Protein accessionYP_001992085 
Protein GI192291480 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.19279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTGT TGCCCGCTTT CGCAGCGACC CAGCCTTCAC CGATTCTGCT GCGTGAGACC 
GTCGATGGCG GTGTTGCAGT GCTGACGTTG AACAGACCGG CCGCGCGCAA CAGCCTGTCG
CTGGAAATGA TCGACGATCT GCACGCGGCG CTGGATCTGA TCGCGCGCGA CGATGGCGTG
CGTGTCGTGG TTATCGCCGC CAATGGCCCG GCGTTCTGCG CCGGCCATGA CCTCAAAGAG
CTGACCGCGC ATCGCAATGA CGCCGATCGC GGCCGTGCCA GCTTCACCCG GATCATGACC
GCCTGCAGTG CGATGATGCA GGCGATCGTC AAGCTGCCCA AGCCGGTGAT CGCGGCGGTG
CAGGGCGTCG CCACCGCGGC GGGCTGTCAG CTGGTCGCGA GCTGCGACCT CGCGATCGCA
TCCGAGCAGG CGACCTTCGC GACGCCCGGC GTCGATATCG GACTGTTCTG CTCCACCCCG
ATGGTGGCGC TGTCGCGCAA CGTGCCGCGC AAGAACGCGA TGCACATGCT ACTGACCGGC
GAGCCGGTCG GCGCCGAAGA GGCCCGCCAG ATCGGCCTGA TCAACCGCGT GGTGCCGCAC
GGCACCGAGC GCGCCGCGGC CGTCGCACTG GCCGAGCAGA TCGCCGGCAA GTCGGCCCAC
ACCATCAAGA TCGGCAAGGA GGCGTTCTAC CGCCAGGCCG AGCTCAACCT CGCCGACGCC
TATCACTACG CCTCGCAGGT GATGGCCGAG AACATGATGG CCGCCGATGC CGAAGAAGGC
ATTTGTGCCT TCCTGGAAAA GCGCCAGCCG GAATGGAAGG ATCGTTGA
 
Protein sequence
MTVLPAFAAT QPSPILLRET VDGGVAVLTL NRPAARNSLS LEMIDDLHAA LDLIARDDGV 
RVVVIAANGP AFCAGHDLKE LTAHRNDADR GRASFTRIMT ACSAMMQAIV KLPKPVIAAV
QGVATAAGCQ LVASCDLAIA SEQATFATPG VDIGLFCSTP MVALSRNVPR KNAMHMLLTG
EPVGAEEARQ IGLINRVVPH GTERAAAVAL AEQIAGKSAH TIKIGKEAFY RQAELNLADA
YHYASQVMAE NMMAADAEEG ICAFLEKRQP EWKDR