| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3093 |
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| Symbol | |
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| ID | 6410764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3338592 |
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| End bp | 3339644 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642712973 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001992074 |
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| Protein GI | 192291469 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.110896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCGACGA AGGGCTGGTG GACGGCGGCA CGGCTGCAGC TTGCTTATGC GAGTGGCGCC
GCGCGCATTT CGGAATGGAA AGGCGGCGGC TGCGGGGGCG TTCTGCGGTT CGATCGGGTG
CGGCCGGCGC GCCGCGACCG GTTTCAGCCG CTTCGGTCTC GCGAAATTAC ACCGCAGTTT
CTCGATAGCC TGCTGCGCGC GCTGAAGCGC TGGAATTGTC CGGTCATCTC AGCCGCCGAA
GTCTGCGCCC GGATCGCGCG AGGCGGCTCG CCGGGGCGGT TCGTCTGTCT GACTTTCGAT
GGCGGCTCGC GGGACATCAC CACCTTCGCT TATCCGATCC TGGCGCGACA CGGCGTGCCG
TTCGCGGTGT ATCTGCCGAC GGCGTTTCCC GACGGCATCG GCGAAGCGTG GTGGCTGGCA
CTGGAGCAGG TGATCGCGCG CACCGAGCGG ATCGCGCTGC TGATCGACCA CAACGAACGC
CGGTTCGACA CGGCCACGCT CGCCGACAAG ACGCAAGTGT TCCACTTCCT AGCGAGCTGG
CTGCGCACGA TGCCGCCCGC GGCACTTACG GCTGCGATTC AGGATCTGTG CAAGCGCTAT
GCGGTCGATC TCGCCGTGGT GACACGCGAG GCAGTGATGG ACTGGGACGA GATCGGCCGG
CTCGCTGCCG ATCCCAAAGT GACGATCGGA AGTGCCACGG TGAACTACCC GGTGTTGGCC
AATCTGCCGG ACACGGCGGC GCGGAAGGAG ATCGCGATGG GTCGCGCAGT GCTGCAAGCC
GCGCTCGGCC GCGAGGCCGC GCAATTCGCG TTTCCGTTCG GCGAAAGTGG CAGCTTCGGA
GCGCAGCATG TCGCGATGGC CAAGGAGGCG GGCTTCGCCG GGGCGATGAC GTCGATCCCT
GGCGTGATCG GGGCCGGCCC GACCGATCCG CTGGCGCTGC CCCGGATCGC CTGGGACGGC
CGGCAGCGCT CGCTGCGAGA CCTGAGAGTG ATCCTGTCCG GCCTGATGCC GGGCGCGGCG
CGGGGCATGG GGCGGAGCAC TGGCCCGAGA TAG
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| Protein sequence | MSTKGWWTAA RLQLAYASGA ARISEWKGGG CGGVLRFDRV RPARRDRFQP LRSREITPQF
LDSLLRALKR WNCPVISAAE VCARIARGGS PGRFVCLTFD GGSRDITTFA YPILARHGVP
FAVYLPTAFP DGIGEAWWLA LEQVIARTER IALLIDHNER RFDTATLADK TQVFHFLASW
LRTMPPAALT AAIQDLCKRY AVDLAVVTRE AVMDWDEIGR LAADPKVTIG SATVNYPVLA
NLPDTAARKE IAMGRAVLQA ALGREAAQFA FPFGESGSFG AQHVAMAKEA GFAGAMTSIP
GVIGAGPTDP LALPRIAWDG RQRSLRDLRV ILSGLMPGAA RGMGRSTGPR
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