| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3089 |
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| Symbol | |
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| ID | 6410760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3331756 |
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| End bp | 3333312 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712969 |
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| Product | Undecaprenyl-phosphate glucose phosphotransferase |
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| Protein accession | YP_001992070 |
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| Protein GI | 192291465 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.411544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCGA TCAGCGCACG TTCGATGATC AGTGCTGCTG CGACGGAAGC CGTGGTCGCC
AGCGGCGACG GCGCGCCGCG GGTGGAACGC CGCAAGCGGT TGTCGCCGGC CGCCCTCGCC
GTCGCCAATC AGAAGGTGCC GCCGGCGTTT TCGCCGATCG TGATCGCCGG CTCCGTCCGC
CTCGCCGATT TTCTCGTGAT CGCCGCCGTC GGCATCGCGC TGTACTTCGC GCTCGTGGTC
CGCCGCGACG GCTTTGCCTG GGAGTACATC GCGGCGATCA TCGGCACCAC GGCGACTGCG
GTCGTCGCGT TCCAGGCTGC CGATCTTTAC AAGGTGCAAC TGTTCCGCGG CACCTTGAAA
CAGATGACCC GGATCATATC GACGTGGTCG ATCGTGTTCC TGCTGTTCAT CGGCGCATCG
TTCTTCGCCA AGCTCGGCGG CGAGGTGTCG CGGCTGTGGC TGGGTTCGTT CTTTTTCGCC
GGCCTCGCCT TGCTGATCAT CGAGCGATTG TCGGTGCGCG CGCTGGTGCG GCGCTGGGCG
TCGCAAGGCC GGCTCGACCG CCGCACCGTG ATCGTCGGTG CCGACGCTAA TGGCGCCAAG
CTGATCGAAG CGCTGAAGGC CGAGCACGCC GACGCCTCCG ACATCCGTAT CCTCGGCGTG
TTCGACGACC GCAACGACGC CCGCTCGCAG TCCACTTGCG CGGGCGTTCC GAAGCTCGGC
AAGGTCGATG ACATTCCCGA ATTCGCCCGC CGCACCCGTG TCGATCTCGT GCTGTTCGCG
CTGCCGATCT CGGCCGAGAC CCGCATCCTC GACATGCTGA AGAAGCTGTG GGTGCTGCCG
GTTGACATCC GGCTGTCGGC GCACACCAAC AAGCTGCGGT TCCGGCCGCG CGCCTATTCC
TATGTCGGCA AGGTGCCGAC GCTCGACGTG TTCGAAGCGC CGATCACCGA TTGGGATCAG
GTGATCAAGC AGGTATTCGA CCGCGTCGTC GGCGGTTTCA TCCTGCTGCT CGCCGCCCCG
GTAATGGCTT TGGTAGCGCT GGCGATCAAG CTCGACAGCC CGGGTCCTGT GCTGTTCCGG
CAGAAGCGGT TCGGCTTCAA CAACGAGCGC ATCGACGTGC TCAAGTTTCG GTCGATGTAT
CACGACCAGG CCGATCCCAC TGCGTCAAAG GTCGTCACCC GCAACGACCC GCGCGTCACC
CGGGTCGGCC GCTTCATCCG CCGCACCAGC CTCGACGAGC TGCCGCAACT GTTCAACGTG
GTGTTCAAGG GCAATCTGTC GCTGGTCGGC CCGCGCCCGC ATGCGGTGCA GGGCAAGCTG
CAGAGCCAGC TGTTCGACGA AGCCGTCGAC GGCTACTTCG CCCGCCACCG CGTCAAGCCG
GGTATCACCG GCTGGGCCCA GATCAACGGC TGGCGCGGCG AGATCGACAA CGAAGAGAAG
ATCCAGAAGC GCGTCGAGTT CGACCTGTAC TACATCGAGA ACTGGTCGGT CCTGTTTGAC
CTCTACATTC TGCTGAGAAC TCCGTGGGCG CTGCTCAAGG GCGAGAACGC GTACTGA
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| Protein sequence | MEPISARSMI SAAATEAVVA SGDGAPRVER RKRLSPAALA VANQKVPPAF SPIVIAGSVR
LADFLVIAAV GIALYFALVV RRDGFAWEYI AAIIGTTATA VVAFQAADLY KVQLFRGTLK
QMTRIISTWS IVFLLFIGAS FFAKLGGEVS RLWLGSFFFA GLALLIIERL SVRALVRRWA
SQGRLDRRTV IVGADANGAK LIEALKAEHA DASDIRILGV FDDRNDARSQ STCAGVPKLG
KVDDIPEFAR RTRVDLVLFA LPISAETRIL DMLKKLWVLP VDIRLSAHTN KLRFRPRAYS
YVGKVPTLDV FEAPITDWDQ VIKQVFDRVV GGFILLLAAP VMALVALAIK LDSPGPVLFR
QKRFGFNNER IDVLKFRSMY HDQADPTASK VVTRNDPRVT RVGRFIRRTS LDELPQLFNV
VFKGNLSLVG PRPHAVQGKL QSQLFDEAVD GYFARHRVKP GITGWAQING WRGEIDNEEK
IQKRVEFDLY YIENWSVLFD LYILLRTPWA LLKGENAY
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