| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3058 |
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| Symbol | |
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| ID | 6410729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3303769 |
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| End bp | 3305973 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642712938 |
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| Product | hypothetical protein |
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| Protein accession | YP_001992039 |
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| Protein GI | 192291434 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0500224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGACG TTGACCAGGA CAACGACGCG CGCGGTTCGG AATCGGCCGC GCGCAAACGG
GTAGGCGATG CCGACGCGCT GTTCCGCAAG CTCAAGGGCT GGTTCAAGCG CGACTATGAC
AGCGAGGGGC AAACCAGCTG GCGTCGCGAG GCCCGCGAAG ACTTCGATTT CGAGGCCGGC
GAGCAGCTGA CTGCGGAAGA CAAACAGGCG CTGCAAGATC TTCGGCGCCC GGTGGTGATC
TTTAACCAGG TCGGCACCTA CGTTGATAGC GTGGCCGGGC AAGAGGTTGC CAACCGCCAG
GAAGTCCAGT TCATCCCGCG CAACGCAGGC GACGTGAAGA AGAACGAGCT TCTGACGTCG
GCGGCGATGT GGTTCCGCGA TCAGTGCGAC GCGGAGGATG AGGAAAGCGA CGCCTTCCGC
GATCTTGTCG TCTGCGGCAT GGGGTGGACG GAAACCCGGC TCGACTATGA GGACAACCCG
CAAGGCGATC CAAAGATTGA GCGTGTCGAT CCGCTCGAAA TGGTGTGGGA CAGCTCGGCG
AAGAAGCGCA ACCTTATCGA TCGGCGTCGG CAATTCCAGA TCCGCCGGAA TATCACGCTG
GACGAGGCCC GCGCCCTGTG CCCCGGAGAT CCCGATAGCC CGTTCGCCGA TGAAGACTAC
AACGCTTCCT GGGTCGATGA TCGCGACGCC GATGGAACGC CGCACGAAAA CGACGGCCGC
CACTACGACA AGGAGCAGAG CGGAGACCGC GACGCCGACG ACGAATGCGT GACGCTCGTT
CGCGCTCAAT GGATCGAGCG CGTACCCTGC TGGTTGGTGC TCGATCCCTT CGACCAGACC
GGGCAGAACA TCCTGACGCT GGATGAGGAG GAGTACCGCG ATCTCGGCAA AAAAATGAAG
GTCGCCGGCG CCCCGATGCC AAAGGCCGTG AAGCAAACCC GCAAGGTCTA TCGGCAAGCG
TACCTCGGCA ATGTGCTGCT CGAAATCGGT GACGCGCCGG TGAGGGGGCG TTTCTCCTTC
CAATGCATGA CCGGCAAGCG CGATCGCAAC CGCAACACGT TCTTCGGCGT CGTGCGGGCG
ATGAAAGACC CGTCTCGCTG GGCCAACAAG TGGCTGATGC AGACGATGCA CATCATGAAC
AGCACTGCGA AGGGCGGCAT TGCCGTCGAG CGGGGCCAGT TCTTCGACGA CGACGACGCC
GGCGCGGAAA GCTGGGCGAA ACAGGATCAG GTGACGTTCC TCAAGCCCGG AGCGCTGGGG
CAAAACCCCA AGATGATGGC GAAGCCGTCG GCTCAATTCC CGCAGGGCTC GTTCGAGCTG
ATGCAGTTCG CGTTCGGTGC GATGGGGCGA GTGTCCGGCA TCAACCTGGA AGCGGTCGGG
ATGCAGACCG GATCGGGACA GGCGGCCGCG CTCGATCTCC AGCGCAAGCA AGCTGTCATG
ACGCTGATGC AGCCCCTGTT TGACGGGCTC CGGCGCTATC GGAAAGAGCA GGGCCGCGTC
CTGCTCTACC TGATCGAGAA CTATCTATCA GACGGCCGGT TGGTGAAGAT CGAGGGGCCG
GAAAACGCGC AATATGTCCA GTTGGTGCGG TCGGCCTACG CCGACGATAC CGCGCAGGGC
TATGACGTCA TCGTTGATGA GGCGCCGACT TCTGCCAACC AGAAGGAGGC CACCTGGGCG
ATGCTGCAAC AGATCCTCCC GGTGATCGGC AAGATGCTTC CGCCGGCGAC GTGGCTTGCT
CTGCTCAAAT ACTCGCCGCT TCCTACCTCG GCGCAGAAGG ACATTTCTGA CAGCATCCAG
CAGGCGCAGC AGGGCGGCGA CCCGGAGCAG CAGAAGCGCG ACGCCGAATT GCAGTTCGCC
CAGGCCAAGC AACAAGCGGA CATTGAGGGC CACAAGGCTC TGACAGCGGC CCGCGTCGAT
GGCATCCGCC AAGAGGCGGC GGCCAAGCGT GATGCCGATA TCGAGCACGC CCGGCACAAG
GCCGTGATGG ACGGCCTGAC GGCGCCGTTC GTCGGTGTCG GGCCGGATGG TCAGCCTGTC
CAGATGCAGG GCCAGGAAGG CAGTCAAGCG GCGCTGATCA TGTCGTTCCT CGCCGAGATG
CGCCGCGACA TGAACACGCT GGCGGCGGCG ATGAACGCGC CGAAACAGCT CATCCGAAAC
GAGCAAGGCG ACATCGTGGG CATCGCGCCC ATGCAACAGG GGTAA
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| Protein sequence | MIDVDQDNDA RGSESAARKR VGDADALFRK LKGWFKRDYD SEGQTSWRRE AREDFDFEAG
EQLTAEDKQA LQDLRRPVVI FNQVGTYVDS VAGQEVANRQ EVQFIPRNAG DVKKNELLTS
AAMWFRDQCD AEDEESDAFR DLVVCGMGWT ETRLDYEDNP QGDPKIERVD PLEMVWDSSA
KKRNLIDRRR QFQIRRNITL DEARALCPGD PDSPFADEDY NASWVDDRDA DGTPHENDGR
HYDKEQSGDR DADDECVTLV RAQWIERVPC WLVLDPFDQT GQNILTLDEE EYRDLGKKMK
VAGAPMPKAV KQTRKVYRQA YLGNVLLEIG DAPVRGRFSF QCMTGKRDRN RNTFFGVVRA
MKDPSRWANK WLMQTMHIMN STAKGGIAVE RGQFFDDDDA GAESWAKQDQ VTFLKPGALG
QNPKMMAKPS AQFPQGSFEL MQFAFGAMGR VSGINLEAVG MQTGSGQAAA LDLQRKQAVM
TLMQPLFDGL RRYRKEQGRV LLYLIENYLS DGRLVKIEGP ENAQYVQLVR SAYADDTAQG
YDVIVDEAPT SANQKEATWA MLQQILPVIG KMLPPATWLA LLKYSPLPTS AQKDISDSIQ
QAQQGGDPEQ QKRDAELQFA QAKQQADIEG HKALTAARVD GIRQEAAAKR DADIEHARHK
AVMDGLTAPF VGVGPDGQPV QMQGQEGSQA ALIMSFLAEM RRDMNTLAAA MNAPKQLIRN
EQGDIVGIAP MQQG
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