| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3048 |
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| Symbol | |
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| ID | 6410719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3297346 |
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| End bp | 3298215 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642712928 |
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| Product | Chromosomal replication initiator DnaA domain |
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| Protein accession | YP_001992029 |
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| Protein GI | 192291424 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACTG AAACTCAACT CAAGGCGGCG GAACGGCGAA AGCGGTTTCA CGAGAGCATC
GCGGCAAGAG CCGCGGCGCT CGCGCCGGCC GTCGCCGCTG CGGCGCCGAC GATCGATGCG
CCGGCAGTGG TGCCGGCGGC CTTGCTCCCC GCGTCGGCTA GTCCGGCGCG GGTGAATCTT
TCTGAGGCGC GACAAGCCGT CATGGTTGAG CCTCGATCGC TCTATGCGCG CGAGATCGTC
TCCGTCGTTG CCAACTACTT CGGGCCAACG GTTGGTGAGC TTCGCGGGTC GCGGCGAGCC
GCAACGTTGA TCATCCCTCG CCATGTCGCC ATGTACCTCG TTAGCGATAC GTGTCCGCAT
TTGAGCCTGC CGGCCATCGG TAGTTTTTTC GGCGGTCGCG ACCATACAAC CATCCTGTAC
GCGGTTCGCA AGGTCGAGAA GCTGCAAAAG GACGGAGGAA AGTTGGCGGC GGCAATAGCC
GAACTTCGCG CGAAGATCGC CGAGCTCGCT GTCTTGCCCG TGGAAGTCAG AGGGGGCGAT
GAGAACGACG AGGATGCGCG GCCTGTTGCT TACCCTTCGA TTGAGCGGGT GCAGCGGGTC
GTGGCGCGCT TCTATCATTT GACCGTCGAT GATCTGACCG GGAAGCGGCG TGAACGTCAC
GTGCGCCACG CGAGAGCGGT AGCGATCTAT CTATGCCGAA TGCTGACAGA CTACTGTAAC
TCCGCGATCT CGGAGAAGTT CGGCGCGCGC CGGCACTATG CAACTGTGCC GAGCTATGTC
GATGCCGTCT CAATACAGCT GGGCGAGAGT TCTCGGCTTG CCGCGGATAT TCGGTCCTTG
ACCGATCTTA TCAAATCCGG GGGCGGGTAG
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| Protein sequence | MLTETQLKAA ERRKRFHESI AARAAALAPA VAAAAPTIDA PAVVPAALLP ASASPARVNL
SEARQAVMVE PRSLYAREIV SVVANYFGPT VGELRGSRRA ATLIIPRHVA MYLVSDTCPH
LSLPAIGSFF GGRDHTTILY AVRKVEKLQK DGGKLAAAIA ELRAKIAELA VLPVEVRGGD
ENDEDARPVA YPSIERVQRV VARFYHLTVD DLTGKRRERH VRHARAVAIY LCRMLTDYCN
SAISEKFGAR RHYATVPSYV DAVSIQLGES SRLAADIRSL TDLIKSGGG
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