Gene Rpal_3031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3031 
Symbol 
ID6410702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp3290268 
End bp3290873 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content64% 
IMG OID642712911 
Productheat shock protein DnaJ domain protein 
Protein accessionYP_001992012 
Protein GI192291407 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.675367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATTG CAGCTTACCC GCTCCATTGG CCGGCAGGCT TTCCCCGTTG GAAGATGGCC 
CGAGCCGGCG GCGCATTCCG GACGAACTTC GACACCGCGC TTAGCAACGT CCGCAAGAGC 
CTTGAGGCGT TCGCGAAGGA CAGCGGAAAA AAGATCGAGC AGCCGGTTTT GTCGAGCAAC 
ATCGACATGA ACCCGCTGAC CGCCAACACC GGCAAGCGCC CGAGCGACCC CGGCGTTGCC 
GTGTGGTTCA CCTGGGACGG TTTGCAAGTC TGCATCCCGG TCGATCGCTA CGACAGCCCC 
GCCGCGAACT TGCAGGCTAT CCATCACATC ATCGAGGCCC GGCGCACAGA ACTACGCCAC 
GGCACCCTTG CGCTTGTCCG CGCCACGTTC ACCGGGTTTC AAGCGTTGCC GGCTCCGGCC 
GGTCAACACT GGCGCGACGT GCTTGGGCTC GACAGCGTCC CGCCGGCGAG CATCAGCCGC 
GCGACGATCG AGAACAAATA CCGCGACCTC GCCCGCGAGC GGCACCCCGA CAAGGGCGGA 
ACGTCCGAAC AGATGGCGCA GCTCAACAAC GCTCGCGAAA CCGCGCTCCG GGAGATTGCA 
CTATGA
 
Protein sequence
MSIAAYPLHW PAGFPRWKMA RAGGAFRTNF DTALSNVRKS LEAFAKDSGK KIEQPVLSSN 
IDMNPLTANT GKRPSDPGVA VWFTWDGLQV CIPVDRYDSP AANLQAIHHI IEARRTELRH 
GTLALVRATF TGFQALPAPA GQHWRDVLGL DSVPPASISR ATIENKYRDL ARERHPDKGG 
TSEQMAQLNN ARETALREIA L