Gene Rpal_3011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3011 
Symbol 
ID6410681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp3276298 
End bp3277269 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID642712890 
Productthiamine-monophosphate kinase 
Protein accessionYP_001991992 
Protein GI192291387 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTCCG GTGAAGACGA TCTGATCGCG CGGTACTTCA AGCCTCTGGC GACCGATCCG 
GGCGCGCGGG GGCTGGTGGA TGACGCTGCC GTCTTGGCGG CCACGGGCAG CGACCTGGTG 
CTGACCACCG ACGCGATCGT CGAGGGCGTG CATTATCTTC CCGCCGACCC GCCGGCGGCG 
ATCGCCCGCA AGGCACTCCG GGTCAATCTC TCCGATCTGG CCGCCAAGGG CGCCGAGCCG 
GCCGGCTTTC TGCTGACGCT GGCGCTGCGC CAGGCCGATG AGGGCTTTTT GGCCCCGTTC 
GCCGCCGCGC TCGGCGAAGA CGCCGTGGCG TTCCGCTGCC CGCTGCTCGG CGGCGATACG 
GTGTCGACGC CAGGCCCGAT GATGATCTCG GTCACCGCAC TCGGCCGGGT GCCACCGGGC 
CGGATGGTGG CGCGCGACGC GCTGCGGCCC GGCGACGCGA TCGTCGTCAC CGGCACCATC 
GGTGATGCCG CGCTCGGGCT CGACCTGCTG CAGGGCCGGG CGACGGCGGC GACCGAGGCT 
GGCCGAGCGT TCCTGATCGA TCGCTACCGG GTGCCGCAGC CGCGCTCGGC GCTGGCGCAA 
GCGGTGCGCG ACTTCGCCGG CGCAGCGATG GACGTCTCCG ACGGACTCGC CGGCGATCTC 
GCCAAGATGT GCGCCGCCTC CGGCGTCACC GCGACTCTCG ACGCTACCGC AGTGCCGTTG 
TCGGATGCTG CACGTGCGAT CGCGGGAACC GATGAGTCGA AGCTGGCGCG ATTACTCAGC 
GGCGGCGATG ACTACGAACT GCTTTGCGGC GTTGCACAAA GCAAATTGGA TCAGTTCCTT 
GCTGCGGCGC AGCGGAGCCA TGTGCAGGTG ACAGTCATCG GCGTTGCCGA AGAGGGAACC 
AGATCGCCGC GTTGGCTCGG CGCGAGCGGT GCTGAAATCC CGCTGCAGAC GCTGTCTTTC 
AGTCACTTCT GA
 
Protein sequence
MPSGEDDLIA RYFKPLATDP GARGLVDDAA VLAATGSDLV LTTDAIVEGV HYLPADPPAA 
IARKALRVNL SDLAAKGAEP AGFLLTLALR QADEGFLAPF AAALGEDAVA FRCPLLGGDT 
VSTPGPMMIS VTALGRVPPG RMVARDALRP GDAIVVTGTI GDAALGLDLL QGRATAATEA 
GRAFLIDRYR VPQPRSALAQ AVRDFAGAAM DVSDGLAGDL AKMCAASGVT ATLDATAVPL 
SDAARAIAGT DESKLARLLS GGDDYELLCG VAQSKLDQFL AAAQRSHVQV TVIGVAEEGT 
RSPRWLGASG AEIPLQTLSF SHF