| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2990 |
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| Symbol | |
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| ID | 6410660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3260454 |
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| End bp | 3262019 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712871 |
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| Product | acyl-CoA synthetase |
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| Protein accession | YP_001991973 |
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| Protein GI | 192291368 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.475631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCAGC TTCATTCCGG CGGCACCGGC GGCAGCCTGA TCGTCAATGC GATCGCGCGT
TACGGCGACC GTCCGGCGAT CGCCGACGGC AGCATCCGCT GGAGCTACCG CGAACTCGGC
GACGCGATCG GCCGCTTCAT CACGCTGTTT CGCGACTGCG GCCTCGCCAA GGGCAGCGCG
CTGTCGATCC TGTCGTCGAA CCGCGCCGAA TCCTGGGCCG CGATCTGCGC CGCAACCGTG
ATGGGGATGC GCTATACGCC GCTGCATCCG ATGGCGGCCG AAGACGACCA CGCCTTCATC
ATCGAGGATG CCGAGATCGA CGCGCTGATC GTCGAAGGCG GCAAGTTCGC CGCGCGCGGC
GAAGCGATCC GCGCCCGCGT GCCGGGGCTG AAGCATCTGT TGTCGTTCGG GGCGGTGAAC
GGCGCGCGCG ACCTGCTCGA AGGCTTTGCG GCGGTGCAGC CGGCGCCGCT GGTCGACGAC
AGCGTGACCT CCGACATCGC GTGGCTGGCT TACACCGGCG GCACCACGGG CCGCTCCAAG
GGCGTGATGA TCCCGCATCG CGCGCTGACC ACGATGGCGG TGATCCTGTA TTCGGATTGG
GACTGGCCCG CCGACATCCG CTATCTCGCC GCCACCCCGA TCAGCCACGC CGCCGGCGTC
ACCGTGTATC CGGTGATGAT GCGAGGCGGC TTCACGCGGC TGGTGCAGGG CTTCGAGGTC
GAGTCGTATT GCCGCGTCAT CGCCGAGGAC AAGATCACCG CGGTGTTCCT GGTGCCGACG
CTGATCTATA CGCTGATCGA TGCTGCGGAG GTGAGGGCGC GTCACGATCT GTCGTCGCTC
GACATGATCG TGTACGGCGC CGCGCCGATG TCGCCGGATC GCCTGCGCGA AGGCATCAAG
ATCTTCGGCA ACGTGTTCGT GCAGCTCTAT GGCCAGACCG AAGCGCCGCA ATGCATCACC
ACGATGCGCA AGGTGGATCA CGACGACAGC AAGCCCGGTC GTCTCGGCTC GTGCGGTCGG
CCGAGCCCGC TGCTCGACGT CAGGCTGTTC GACTCCGAGA TGCGTGAGGT CGGCACCGGC
GAGCCGGGCG AGATCTGCGT GCGCGGCACG CTGGTGATGG ACGGCTATTG GAAACGGCCT
GAAGCGACGG CGGAAGCGTT CCGCGGCGGC TGGCTGCACA CCGGCGACGT CGCGGTGAAG
GACGCCGACG GCTATCTCTA TATCGTCGAC CGCACCAAGG ACATGATCAT CTCCGGCGGC
TTCAACATCT ATCCGCGCGA GGTCGAGGAT GCGTTGATGG CGCACCATGC GGTTGCGTCC
GCTGCGGTGA TCGGCGTGCC CGACGACAAA TGGGGCGAGG CGGTGAAGGC GTTCGTGGTG
CTGAAGCCTG GCGCCAACAA CGACGCCGCC GAACTGCAGG CGCATGTCAA AGACAAGCGC
GGCGCGCCGT GGTCGCCGAA GACGATCGAC TTCGTCGAGG CGATTCCGGT CACCGGCCTC
GGCAAGATCG ATCGCAAGGT GCTGCGTGCC CCATATTGGG AAGGCCGCAA CCGCGGCGTC
GCGTAA
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| Protein sequence | MDQLHSGGTG GSLIVNAIAR YGDRPAIADG SIRWSYRELG DAIGRFITLF RDCGLAKGSA
LSILSSNRAE SWAAICAATV MGMRYTPLHP MAAEDDHAFI IEDAEIDALI VEGGKFAARG
EAIRARVPGL KHLLSFGAVN GARDLLEGFA AVQPAPLVDD SVTSDIAWLA YTGGTTGRSK
GVMIPHRALT TMAVILYSDW DWPADIRYLA ATPISHAAGV TVYPVMMRGG FTRLVQGFEV
ESYCRVIAED KITAVFLVPT LIYTLIDAAE VRARHDLSSL DMIVYGAAPM SPDRLREGIK
IFGNVFVQLY GQTEAPQCIT TMRKVDHDDS KPGRLGSCGR PSPLLDVRLF DSEMREVGTG
EPGEICVRGT LVMDGYWKRP EATAEAFRGG WLHTGDVAVK DADGYLYIVD RTKDMIISGG
FNIYPREVED ALMAHHAVAS AAVIGVPDDK WGEAVKAFVV LKPGANNDAA ELQAHVKDKR
GAPWSPKTID FVEAIPVTGL GKIDRKVLRA PYWEGRNRGV A
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