Gene Rpal_2963 details

Gene Information

• Locus tag: Rpal_2963
• Symbol: smpB
• ID: 6410633
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 3234652
• End bp: 3235125
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642712844
• Product: SsrA-binding protein
• Protein accession: YP_001991946
• Protein GI: 192291341
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGAGA AGAACGAGCG CGCGATCAAG GTGGTCGCGG AGAATCGCAA GGCGCGGTTC 
AACTACGCGA TCGACGACAC CATCGAGGTC GGCATCGCGC TGACCGGCAC CGAGGTCAAG 
TCGATCCGCA ACGGCAAGAC CACGATCGCG GAGTCCTACG CCGACGCCCG CGGCAGCGAG 
ATCTGGCTGA TCAACGCCAA TATTCCGGAG TATCTGCAGG CCAACCGCTT CAATCACGAG 
CCGAAGCGGC CGCGCAAGCT GCTGCTGCAC AGGAAGCAGA TCAACAAGCT GATCGGTGCG 
GTCGAGCGCG AAGGCATGAC GCTGATTCCG CTCAAGCTGT ATTTCAACGA GCGTGGCCGC 
GCCAAGCTGC AGCTCGCCCT CGCCAAGGGC AAGAAGCTGC ACGACAAGCG CGAGACCGAA 
AAGAAGCGGG ATTGGAGCCG CGAGAAGGGC CGTCTGCTGC GTTCACGCGG CTGA 

 

Protein sequence

MAEKNERAIK VVAENRKARF NYAIDDTIEV GIALTGTEVK SIRNGKTTIA ESYADARGSE 
IWLINANIPE YLQANRFNHE PKRPRKLLLH RKQINKLIGA VEREGMTLIP LKLYFNERGR 
AKLQLALAKG KKLHDKRETE KKRDWSREKG RLLRSRG