Gene Rpal_2962 details

Gene Information

• Locus tag: Rpal_2962
• Symbol: mscL
• ID: 6410632
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 3234135
• End bp: 3234614
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642712843
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_001991945
• Protein GI: 192291340
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAGCA CCGATTCCGT CCGTCACTTC GAGCAGAAGG GCTCGAAGCT TCTCAAGGAA 
TTTCGCGACT TCGCGATGAA GGGCAATGTC GTCGACCTCG CGGTCGGCGT CATCATCGGT 
GCAGCGTTCG GTGGGATCGT GACCTCGCTG GTCGGCGACG TCATCATGCC GATCATCAGC 
GCGATCACCG GCGGGCTGGA TTTCTCCAAC TACTTCACGG CGCTGTCGAA GTCGGTCACG 
GCCAATACGC TGGCGGAGGC GAAGAAACAG GGTGCGGTGC TCGCCTGGGG CAATTTCCTC 
ACGGTGACGC TGAACTTCCT GATCATCGCG GCGGTGCTGT TCGCGGTGAT CCGGTCGCTG 
AACAAGCTGA AGCAGCAGGC GGAAGAAACC AAGTCGCCGC CGCCGACCCC GACCCGGCAG 
GAAGAGCTCC TGACCGAAAT CAGGGATTTG TTGAAAAAGG GCGCCGGCCC GTCGCCATAG 

 

Protein sequence

MNSTDSVRHF EQKGSKLLKE FRDFAMKGNV VDLAVGVIIG AAFGGIVTSL VGDVIMPIIS 
AITGGLDFSN YFTALSKSVT ANTLAEAKKQ GAVLAWGNFL TVTLNFLIIA AVLFAVIRSL 
NKLKQQAEET KSPPPTPTRQ EELLTEIRDL LKKGAGPSP