| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2936 |
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| Symbol | |
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| ID | 6410606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3204835 |
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| End bp | 3206937 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712817 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_001991919 |
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| Protein GI | 192291314 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1200] RecG-like helicase |
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| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.774385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCCTG CTCTACTCAA TCCATTGTTC GCGCCGGTCA CCAGCCTGAC TGGCGTCGGG
CCGAAACAGG ACAAGCTGTT CCGCTATCTG CTGGACCGCG ACGACACTCC GCGGCTGGCC
GATTTGCTGC TGCATCTGCC GACCAGTGTG ATCGACCGCC GCGCCCGACC CAAGATTCGC
GACGCGGTGC CGGGCACCGT GGTGACCCTG GAGGTCACGG TCGATCGCCA CCGCGCGCCG
CCGCCAGGCC GCTCGCGCGC GCCGTATCTG GTCTATGCCA GCGACGACAC CGGCGACGTG
GTGCTGACGT TCTTCCGCGC CAAGCCTGAC TTTGTGCAGA AACTGCTGCC GGTCGGCGCC
AAACGCTACA TCTCCGGCAC CGGCCAGCTC TACGACGGCA CACTGCAGAT CGTGCATCCG
GACCGCGTCG TCGACGAGGA AGGCTTCGCC AAGCTGCCGC AGATCGACCC GGTGTATCCG
CTGACCGAGG GGCTGGCGAT CGGCTCGCTG CGCCGGGCGG TCGCGCAGGC TCTGACCAAG
CTGCCGGCGC TGCCGGAGTG GATCAGCCCC GAGGTGCTGC GGCGCTGCCG GTTTCCCTCG
TTCGCCGATG CGCTGAAACA CGTCCACATC CCGGATCAGC CAACCGACAT TCTGCCGGAC
GGGCCATATT GGTCGCGCCT TGCCTATGAC GAACTGCTCG CCGGGCAGCT CGCCCTGGCG
CTGGTGCGGG CGCAACTCCG TCGCCCGGCC GGCAGCCGCA ACGCCGGCGA TGGACGGCTG
CGCCACAAGA TCATCGACGC GCTGCCCTAC GCGTTGACCA ACTCGCAGCA GCAGGCCGCC
GCGGCGATCG CCGAAGATCT GCGCCAACCG GTGCGGATGC TGCGATTGCT GCAGGGCGAC
GTGGGAAGCG GCAAGACCGT GGTGGCGCTG CTGGCGGCTG CAGCCGTCGC CGAGGCCGGC
AAGCAGGCGG CGCTGATGGC ACCGACGGAA ATCCTCGCCC GCCAGCACAT CAAGACCATC
GCGCCGCTCG CCGACCGCGC CGGAATGCAG GTCGCAATCC TCACCGGCCG CGAAAAAGGC
AAGGAACGCC GAGAGATCCT GGAGCGGCTT GCCGCCGGCG AGATCGATTT TCTGGTCGGC
ACCCACGCGC TGATCCAGGA CGACGTGATC TACAAATCGC TGGCGCTGGC GGTCGTTGAT
GAACAGCATC GCTTCGGCGT CCGCGAGCGG CTGGCGCTGA CCAGTAAGGG CGCCGATGTC
GACGTGCTGG TGCTCAGCGC GACGCCGATT CCGCGAACAC TGGTGCTGAC TTACTTCGGC
GACATGGACG TCTCGGAACT GCGCGAGAAG CCCGCCGGCC GCCAACCGAT CGACACCCGC
ACGCTGTCCG ACACGCGGCT GCCAGAGGTG ATCGACGGCA TCGGCCGCGC CATCGCCACC
GGCAAGCGGG TGTACTGGAT CTGCCCGCTG GTGGAAGAAT CCGAGAACGT CAAACTCACC
GACGCCGAGC AACGTTTCGA ATCGCTGCGA CAGCGTTTCG GTGATCATCA GGTTGGGCTG
GTGCACGGAC GGATGCGCGG CAGTGACAAG GACCTCGTGA TGGGCCAGTT CGCGCGCGGC
GAAATCAGCG TGCTGGTCGC GACGACAGTT GTCGAAGTCG GCGTCGACGT GCCCGAAGCC
AGCATCATGG TGATCGAAAA CGCCGAGCGG TTCGGCCTGG CGCAGTTGCA TCAGCTGCGC
GGGCGGATCG GTCGCGGCAG CGAAGCCTCC ACCTGCCTGC TGCTGTACCG CGAGCCGCTG
GGTGAGCTTT CGGGGGCACG CTTGCGAGTG ATCCGCGACA CCACCGACGG TTTCCGGATC
GCCGAGGAAG ACCTGAAGCT TCGCGGCGAA GGCGACGTGC TCGGCACAAG GCAGAGCGGC
CTGCCCGGCT ACCGGATCGC GCGCTCAGAA GTTCACGCCC AGCTCATCAC CCAGGCGCGC
GACGAAGCGC TGCGCATCCT GAAGGACAAT CCGAAACTCG AAGGTCCGTC CGGCGAAGCG
CTGCGTTGCC TGCTGTATCT CTACGAACGC GACGAAGCGA TCCCGCTATT AGGTGCGGGT
TAG
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| Protein sequence | MRPALLNPLF APVTSLTGVG PKQDKLFRYL LDRDDTPRLA DLLLHLPTSV IDRRARPKIR
DAVPGTVVTL EVTVDRHRAP PPGRSRAPYL VYASDDTGDV VLTFFRAKPD FVQKLLPVGA
KRYISGTGQL YDGTLQIVHP DRVVDEEGFA KLPQIDPVYP LTEGLAIGSL RRAVAQALTK
LPALPEWISP EVLRRCRFPS FADALKHVHI PDQPTDILPD GPYWSRLAYD ELLAGQLALA
LVRAQLRRPA GSRNAGDGRL RHKIIDALPY ALTNSQQQAA AAIAEDLRQP VRMLRLLQGD
VGSGKTVVAL LAAAAVAEAG KQAALMAPTE ILARQHIKTI APLADRAGMQ VAILTGREKG
KERREILERL AAGEIDFLVG THALIQDDVI YKSLALAVVD EQHRFGVRER LALTSKGADV
DVLVLSATPI PRTLVLTYFG DMDVSELREK PAGRQPIDTR TLSDTRLPEV IDGIGRAIAT
GKRVYWICPL VEESENVKLT DAEQRFESLR QRFGDHQVGL VHGRMRGSDK DLVMGQFARG
EISVLVATTV VEVGVDVPEA SIMVIENAER FGLAQLHQLR GRIGRGSEAS TCLLLYREPL
GELSGARLRV IRDTTDGFRI AEEDLKLRGE GDVLGTRQSG LPGYRIARSE VHAQLITQAR
DEALRILKDN PKLEGPSGEA LRCLLYLYER DEAIPLLGAG
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