| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2919 |
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| Symbol | |
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| ID | 6410588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3186819 |
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| End bp | 3187985 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642712799 |
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| Product | amidohydrolase |
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| Protein accession | YP_001991902 |
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| Protein GI | 192291297 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.54348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCG ATCCCCGCAT CACCACCATC GCGGACGAAG CCATCGTTTG GCGCCGAGAC
ATCCACGCTC ATCCGGAAAT TATGTACGAC CTCGACCGCA CCTCGGCCTT GGTCGCAGAT
CTGCTGCGTC AGTTCGGGTG CGACGAGGTG GTAACGGGGC TGGGACGGAC CGGCGTTGTT
GGCCTGGTAC ACGGTCGGGG TCGTAGCGCC AATCGCGCCA TTGGCCTGCG CGCCGACATG
GATGCGCTGC CCATCGAGGA GGACACCGGC GTTGCCTACG CATCGCAGAC GCCCGGCCGA
ATGCACGCTT GCGGCCATGA TGGTCACACC GCAATGTTGC TCGGCGCAGC CAAGCATCTG
GCCGCCACGC GGGACTTCAA CGGCTCGGTG GCATTCATCT TCCAGCCGGC CGAGGAAGGC
GGCGCCGGCG CCAAGGCGAT GATCGAGGAC GGTCTCTTCA GCCGTTTCCC GATCGATGAG
GTCTATGGCA TGCACAACAA ACCCGGCCTT CCGATCGGGC AGTTCGCCAC CCGCGCAGGC
GCGGTCATGG CATCGACCGA CCGCGTCGAA ATCGAGATCG AAGGCATCGG AGGTCACGCC
GCGCGGCCGC AGCATTCGAT CGATCCGGTT GTCGTCGGGG CACAGATTGT CACCGCGCTG
CAAACGATCG TATCTCGAAC GCTCGATCCG CTTTCTTCTG CGGTTGTTTC GATCACCAAC
TTCCATGCCG GCTCGGCGTT CAACGTCATC CCGCAGAAGG CGACTCTGGT CGGCACCGCG
CGTGCGCTTG ATGGCAAGGT TCGTGACCGG CTGGAGGCCC GCATTGCGGA GCTCTCAACG
CTGATTGCCC AGGCTCACGG GGCGACTGCC CGGGTCACTT ACGAGCGCGG CTATCCGGTG
ACCCGCAACC ACGCTGAACA GACCGCTTTT GCCGCGGATA CGGCCGTTGC AATCACCGGC
AACGACCAGG TCGATCGCGA TCTTGCTCCA ATGATGGGCG CAGAGGACTT TTCCTACATG
CTCGAACAGC GCCCGGGTGC ACTGATCTTC CTCGGCAATG GCGACAGCGC CGGCCTGCAT
CATCCGCGCT ACGATTTTGC CGATGCTGCG ATTCCTTATG GCATCGCCTA CTGGTCCAAG
CTTGTGGAGC GCGCGCTGCC TTTGTGA
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| Protein sequence | MTIDPRITTI ADEAIVWRRD IHAHPEIMYD LDRTSALVAD LLRQFGCDEV VTGLGRTGVV
GLVHGRGRSA NRAIGLRADM DALPIEEDTG VAYASQTPGR MHACGHDGHT AMLLGAAKHL
AATRDFNGSV AFIFQPAEEG GAGAKAMIED GLFSRFPIDE VYGMHNKPGL PIGQFATRAG
AVMASTDRVE IEIEGIGGHA ARPQHSIDPV VVGAQIVTAL QTIVSRTLDP LSSAVVSITN
FHAGSAFNVI PQKATLVGTA RALDGKVRDR LEARIAELST LIAQAHGATA RVTYERGYPV
TRNHAEQTAF AADTAVAITG NDQVDRDLAP MMGAEDFSYM LEQRPGALIF LGNGDSAGLH
HPRYDFADAA IPYGIAYWSK LVERALPL
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