| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2918 |
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| Symbol | |
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| ID | 6410587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3185033 |
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| End bp | 3186649 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642712798 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_001991901 |
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| Protein GI | 192291296 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.258086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCTCT CGCGGATCGA GATTAGCCGC CGCACTGCGC TACTGACGTC GGCCGCGATC
GCCGCCAATG TGATCAACCC AATGCGCGCC TTCGCACAGG AGACGCCGCG CAAGGGCGGC
GTGTTCAACG TGCACTACGG CGCCGAACAG CGGCAGCTCA ATCCGAGCCT GCAGGCCTCG
ACCGGCGTCT ACATCATCGG CGGCAAGATC CAGGAACCGC TGGTCGACCT CGACGCAGCC
GGCAACCCGG TCGGCGTGCT GGCGGAAAGC TGGGAATCCA CGCCTGACGG CAAGACCATC
ACCTTCAAGC TGCGCAAGGG CGTGACCTGG CACGACGGCA AGCCGTTCAC CTCCGAGGAC
GTCGCCTTCA CGGCGATGAA CATGTGGAAG AAGATCCTCA ACTACGGATC GACGCTGCAG
CTCTTCCTCA CCACGGTCGA CACGCCCGAT CCGCAGACCG CGATCTTCCG CTACGAGCGG
CCGATGCCGC TGAACCTGCT GCTGCGCGCG CTGCCGGATC TCGGCTACGT CTCGGCCAAG
CACATCTACG AGACCGGTGA CATCCGCCAA AATCCGGCCA ACCTGGCGCC GATCGGCACC
GGCCCGTTCA AGTTCAACAA ATACGAGCGC GGCCAGTACA TCATCGCCGA CCGCAACGAC
AATTACTGGC GGCCGAACGC CCCCTATCTC GACCGCATCG TCTGGAAGGT GATCACCGAC
CGTGCCGCGG CTGCGGCCCA GCTCGAAGCC GGCGGACTGC AGCTCAGCCC GTTCTCTGGT
CTGACGATTT CCGACATGGC TCGGCTCGGC AAGGACAAGC GCTTCATCGT CTCCACCAAG
GGCAACGAAG GCAACGCCCG CACCAACACC ATCGAATTCA ACTTCCGCCG CAAGGAGCTG
TCGGACATCC GTGTCCGCCG CGCCATCGCG CACGCCATCA ACGTGCCGTT CTTCATCGAG
AACTTCCTCG GCGACTTCGC CAAGCTCGGC ACCGGCCCGA TCCCTTCGAC CTCGACGGAC
TTCTATCCGG GCCCGAACAC GCCGCAATAT CCCTATGACA AGCAGAAAGC GATCGCCCTG
CTCGACGAGG CCGGCCTGAA GCCCGGCGCC GGCGGCAACC GGCTGTCGCT GCGGCTGCTC
CCCGCGCCGT GGGGCGAGGA CATCTCGCTT TGGGCGACCT TCATCCAGCA GTCGCTGGGT
GAGGTCGGCA TTCAGGTCGA AGTGGTGCGC AACGACGGCG GCGGCTTTCT CAAGCAGGTC
TATGACGAGC ACGCGTTCGA TCTCGCCACC GGCTGGCACC AGTATCGCAA CGATCCCGCG
GTCTCGACCA CGGTGTGGTA TCGCTCCGGT CAGCCGAAGG GCGCGCCCTG GACCAACCAG
TGGGGCTGGG AAGACCCGGC GATCGACAAG ATCATCGACG ACGCCGCGAC CGAAGTCGAT
CCCGCCAAGC GCAAGGCGCT GTATGCCGAC TTCGTCACCC GAGCCAATAC CGAGCTGCCG
ATCTGGATGC CAATTGAGCA ATTATTCGTC ACGGTGATCA CTGCGAAGGC GCGCAATCAC
TCCAATACGC CACGCTGGGC GTCATCGACC TGGCACGATC TTTGGCTGGC CGAATAG
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| Protein sequence | MPLSRIEISR RTALLTSAAI AANVINPMRA FAQETPRKGG VFNVHYGAEQ RQLNPSLQAS
TGVYIIGGKI QEPLVDLDAA GNPVGVLAES WESTPDGKTI TFKLRKGVTW HDGKPFTSED
VAFTAMNMWK KILNYGSTLQ LFLTTVDTPD PQTAIFRYER PMPLNLLLRA LPDLGYVSAK
HIYETGDIRQ NPANLAPIGT GPFKFNKYER GQYIIADRND NYWRPNAPYL DRIVWKVITD
RAAAAAQLEA GGLQLSPFSG LTISDMARLG KDKRFIVSTK GNEGNARTNT IEFNFRRKEL
SDIRVRRAIA HAINVPFFIE NFLGDFAKLG TGPIPSTSTD FYPGPNTPQY PYDKQKAIAL
LDEAGLKPGA GGNRLSLRLL PAPWGEDISL WATFIQQSLG EVGIQVEVVR NDGGGFLKQV
YDEHAFDLAT GWHQYRNDPA VSTTVWYRSG QPKGAPWTNQ WGWEDPAIDK IIDDAATEVD
PAKRKALYAD FVTRANTELP IWMPIEQLFV TVITAKARNH SNTPRWASST WHDLWLAE
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