| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2915 |
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| Symbol | |
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| ID | 6410584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3181578 |
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| End bp | 3183200 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712795 |
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| Product | ABC transporter related |
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| Protein accession | YP_001991898 |
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| Protein GI | 192291293 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0265985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGC CCGCAGTTCT CACGCTCGAC AAAGTCAGCG TCCGGCTGCC CGCCGGCGCC
GACCGCAGCC ATGCCGTGCG CGACGCATCG CTGACGATCG CCGCCGGCGA AATCCTCTGC
GTGGTCGGCG AGTCTGGGTC CGGCAAATCG ATCATGGCGA ACGCCGTGAT GCAGCTCCTA
CCCGGCGGGG TCGCGCTCGA TGGCGGCTGC GTGCTGTTCA AGGGCCGCGA CCTTGCGCAG
GCCAGCGCCG CGGAGATGCG CAAGGTTCGC GGCGCAGGCA TCGCCATGGT GTTTCAGGAG
CCGATGACCG CGCTCAATCC GCTACGCACC ATCGGAGATC AGATCGGGGA GATGTTCTCG
ATCCACACCG ATCTGTCGAA GCGAGACATC AAGTCCAAGG TGCTTGCGCT GCTGACCGAC
GTGCGCATTC CCGATCCGGC GCGTGCCGCC GGCGCATATC CGCACGAACT CTCCGGCGGC
CAGCGCCAGC GCGCCATGAT CGCGATGGCG CTCGCGCTCG ATCCCAAGCT GCTGATCGCC
GACGAGCCAA CGACTGCGCT CGACGTCACC ACACAAGCGC AGATCCTCAC TCTGATCCGC
GAACTACAAA GCCGGCGCAA CACTGCGGTG CTTTTCATCA CCCATGATTT CGGCGTCGTC
GCCGAGATCG CCGATCGCGT CGTGGTGATG CAGCACGGCG TCATCGTCGA GCAGGGCCAG
GCCGATGACG TGCTGAACCG GCCGCAGCAC GCTTATACGC GGCAACTGAT CGCGGCGGTG
CCGCCGCTGA CCGCCCCGCC GCCGCGTCCA TTTGGCAGCG ACACGATCCT GAGCATCGAC
AACGTGTCGA AGACGTTCCG CACCGGTGGC TTTCTCGGCC GCGGCGCGCG CGTCACCGAC
GCGGTGAAGA ACGTCTCGCT GAAATTGCCG AAGGGAGCGA CGCTCGGCAT CGTTGGCGAG
AGCGGCTCCG GCAAGTCGAC GCTGGCGCGC TGCATCATCC GCCTGCTCGA TCCGGACGCG
GGCTCGATCC TGCTCGACGG CCGTGACTGG GCGACGATGC CGCGCGAGCA GGTGCGGCGC
GAAACGCGCC ACATGCAGAT GGTGTTTCAG GACCCGTTCG CTTCGCTCAA TCCGCGGCAC
AAGGCCGAGG AATTGGTCGC GCAAGGCCCG ATCATCCACG GCACGCCGCG CAAGCAGGCA
ATCGCCGAGG CGCGCAAACT GTTCGAGTTG GTCGGGCTGG ATCCCGCCGC CGGCGACCGG
CTGCCGCACG AATTCTCCGG CGGTCAGCGC CAGCGGATCG GCCTCGCCCG CGCGCTGGCG
CTGAAGCCCG ACGTGCTGAT CGCGGATGAA GCCGTATCGG CGCTCGACGT TTCGGTGCAG
GCGCAGGTTC TCAAGCTGCT GACCGACTTG CGCGAGCAAC TTGGGCTGTC GATTATCTTC
ATCACCCACG ACCTGCGCGT CGCCGCGCAG ATCTGCGATC TCGTCGCCGT GATGAAGGAC
GGCGCAGTCG TCGAGCACGG CCCCGCCGGT GACGTCTTCA ACGCCCCGCA GCACCCCTAC
ACGCAAGCCC TGCTCGCCTC GATCCCGGGC GGAGATTTCG CGCGCTGCCA CGCGCTGACC
TAG
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| Protein sequence | MTAPAVLTLD KVSVRLPAGA DRSHAVRDAS LTIAAGEILC VVGESGSGKS IMANAVMQLL
PGGVALDGGC VLFKGRDLAQ ASAAEMRKVR GAGIAMVFQE PMTALNPLRT IGDQIGEMFS
IHTDLSKRDI KSKVLALLTD VRIPDPARAA GAYPHELSGG QRQRAMIAMA LALDPKLLIA
DEPTTALDVT TQAQILTLIR ELQSRRNTAV LFITHDFGVV AEIADRVVVM QHGVIVEQGQ
ADDVLNRPQH AYTRQLIAAV PPLTAPPPRP FGSDTILSID NVSKTFRTGG FLGRGARVTD
AVKNVSLKLP KGATLGIVGE SGSGKSTLAR CIIRLLDPDA GSILLDGRDW ATMPREQVRR
ETRHMQMVFQ DPFASLNPRH KAEELVAQGP IIHGTPRKQA IAEARKLFEL VGLDPAAGDR
LPHEFSGGQR QRIGLARALA LKPDVLIADE AVSALDVSVQ AQVLKLLTDL REQLGLSIIF
ITHDLRVAAQ ICDLVAVMKD GAVVEHGPAG DVFNAPQHPY TQALLASIPG GDFARCHALT
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