Gene Rpal_2901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2901 
Symbol 
ID6410570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp3165853 
End bp3166941 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content67% 
IMG OID642712781 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001991884 
Protein GI192291279 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATGCGC TCGAGCTCCA GGAGACCAAG ACCATATCGC AGCGACGCAG CTTCGGCTGG 
CCGAAGCCGG TTGTAGCGCT GTTCGGCGGC TGGCGTCGCG CGCTTGTGAC GTTCGCGGTG 
TTGGCGCTGA TCCTGTGGCT CGGGGTGCCG CTGCTGCAGT GGCTGCTGCT CGACGCGACG 
TGGCAAGGCA GTTCGGCCGA GTGCGCGGCG CGCGGGGGCG CATGCTGGGC GTTCGTCGCC 
GCCAAACTGC GGTTCTTCCT GTTCGCGTTC TATCCGGCCG ATGGGCTGTG GCGCCCCGTA 
GTGGTGTGCG GGCTGCTGAT CGTCCTGCTG CTCGCGAGCG CGATGCCGCG CCTGTGGGGC 
GCGCGCCTCG TCGTGGCTTG GCCGGTCGTG ATCGGGCTCT GTCTGGCGCT GATGAGCGGC 
CTGCCGGGCG GAGCTGTCGT GTCGTCCAAC CAATGGGGCG GGCTTCCCAT CACGTTGCTG 
GTGTGGGTAA TCTGTTTCGC CACGTCGGTG CCGATCGCGG TCCTCTTGTC GTTGGCGCGG 
CGTTCGCGGA TGCGGATCGT ACGCTGGCTC GCCATCGGCT ACATCGAACT GATGCGGGCG 
ATCCCGATGG TCGCGATCCT GTACTTCGCC ACGCTGATTT TGCCGATGGC ACTGCCGGGC 
AGCGTTCCGC TCGACAAACT GCCGCGTGCG ATCGTCATGC TTGCGCTGTT CTGGACCGCC 
TATGTGGCCG AGGTCGTGCG CGGCGGGCTG CAGGCCGTAC CGAGGGGACA GGAGGAAGCG 
GCGCTGGCGC TCGGGTTGGG CTACTGGCGG TCGATGCGGC TGATCGTGTT GCCGCAGGCG 
CTGCGGGCCG TCGTGCCCGG CTTGGTCAAT CTCGGCATCG GCTTTCTGCT GGCGACCTCG 
CTGCTCGCGG TGATCGGGAT CATGGATATT ATAGGCGCGG CGAAAGCTGC CGCGGCCGAT 
CCCGAGTGGC TCGGCTACTA CAAGGAGGCC TTCCTCGTGG TGGCGCTCGT CTATTTTGTC 
ATGGGCTACA GCGGCTCGCG CTACAGCCTC TGGCTGGAGC GGCGGCTGGG TACATTCAGC 
GGGCGCTGA
 
Protein sequence
MNALELQETK TISQRRSFGW PKPVVALFGG WRRALVTFAV LALILWLGVP LLQWLLLDAT 
WQGSSAECAA RGGACWAFVA AKLRFFLFAF YPADGLWRPV VVCGLLIVLL LASAMPRLWG 
ARLVVAWPVV IGLCLALMSG LPGGAVVSSN QWGGLPITLL VWVICFATSV PIAVLLSLAR 
RSRMRIVRWL AIGYIELMRA IPMVAILYFA TLILPMALPG SVPLDKLPRA IVMLALFWTA 
YVAEVVRGGL QAVPRGQEEA ALALGLGYWR SMRLIVLPQA LRAVVPGLVN LGIGFLLATS 
LLAVIGIMDI IGAAKAAAAD PEWLGYYKEA FLVVALVYFV MGYSGSRYSL WLERRLGTFS 
GR