| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2884 |
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| Symbol | |
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| ID | 6410553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3145580 |
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| End bp | 3146527 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642712764 |
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| Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
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| Protein accession | YP_001991867 |
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| Protein GI | 192291262 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.877922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGCC GACAATTCCT CCAATTATCT GCCGGAACCG CTCTACTGCC GATTCTGTCA
CGCTCAGCCG CAGCTGAGCC GCTGACCGAG ATCCGCATCG GCTATCAGAA GAACGGCGTG
TTGGTAATCG CGCGGCAACG GCGGACGCTG GAGGATCACT TCGCCGCACA GAATATCGGC
ATCAAATGGC TGGAATTTTC GTCCGGTCCC CCGATGCTCG AGGCGATGAA CGTCGGCAGC
ATTCACTATG GCGCCGTCGG TGACGCGCCG CCGATCTTTG CCCAGGCTGC TGGCGCTGCA
ATCGTCTACG CAGCAGGCCA GCCGATCACC AACGGTCAGG GTATCCTGGT TCCGAAAGAT
TCGCCGATCC GCGGTCTCGC CGATCTCAAG GGCAAGCGCA TCGGCTTCAC AAAGGGGTCG
AGCGCCCACA ATGTGGTCTT GCTGGCGCTC AAGAAGGCCG GCCTGACCTA TGGCGACATC
ACGCCGGTCT ACCTGTCGCC GCCGGACGCC GGCCCCGCAT TCGCGCAAGG CGGCATCGAT
GCCTGGTCGA TCTGGGACCC ATATTTCGCG ATCGGCGAAT TGAAGCAGAA TGGGCGCGTG
CTGATCAATG CATCCGAGGT CGGCCGGACC AACTCGTTCT ACATCGCCAA CCGTGAATTC
GCTCAACGAA ATGCGTTGAT CCTCAAGCAG ATCATCGACG TCACCAGCGC GACCGCGCGA
TGGGCAGAAG ATCATCGCGG CGACGTCGCT CAGTCCCTCA GTGCCGTCAC AGGCATCCCG
CTCGACATCC AGACGATCGC TGCCAACCGG TCGTCATTTG TGGTTGGGCC GGTGACCGAC
GAGATCGTCT CGACCCAGCA GGACGTCGCC GACCGCTTCC ATCAGCTAGG CCTGATTCCC
CGCCCGATCG TGGTGCGCGA TGCAGTGTGG CGGCCGCCAC AGGCTTGA
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| Protein sequence | MQRRQFLQLS AGTALLPILS RSAAAEPLTE IRIGYQKNGV LVIARQRRTL EDHFAAQNIG
IKWLEFSSGP PMLEAMNVGS IHYGAVGDAP PIFAQAAGAA IVYAAGQPIT NGQGILVPKD
SPIRGLADLK GKRIGFTKGS SAHNVVLLAL KKAGLTYGDI TPVYLSPPDA GPAFAQGGID
AWSIWDPYFA IGELKQNGRV LINASEVGRT NSFYIANREF AQRNALILKQ IIDVTSATAR
WAEDHRGDVA QSLSAVTGIP LDIQTIAANR SSFVVGPVTD EIVSTQQDVA DRFHQLGLIP
RPIVVRDAVW RPPQA
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