| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2881 |
|---|
| Symbol | |
|---|
| ID | 6410550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 3142707 |
|---|
| End bp | 3143549 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642712761 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001991864 |
|---|
| Protein GI | 192291259 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.542857 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGAAG CCCTTCAATT CCTTCTCGCC GCCCCTCCCG GCGCCTACGA TCCGGTCGCC
CGCACGATCG AGGATGAACC TCGTCCCTCG CAGCCTCCGA CAAGTGCGCT CGCGCTCGAT
ATTCGTGGTT TGCGCAAATC CTTCGGCGAC AACGACGTGC TTCGCGGGAT CGACCTGCAT
ATCCCGGCCG GCCAATTCGT GACCATCGTT GGCCGCAGCG GCTGCGGCAA GAGCACGCTG
CTGCGGTTGA TCGCCGGGTT GGAAACTCCG ACCGCAGGCC ACATCGTGTT CGGCGAAGAC
AAACTGCCGG GCGACGTCCG CGTCATGTTC CAGGAGCCGC GCCTGCTGCC TTGGGCACGG
GTCCTCGCCA ATGTGGAGGT CGGCCTCGGC ACCGAACGTA ACTCACCGGA CGCCCGGGCC
CGCGCCGACG CGGCACTGAT CGAGGTCGGT CTCGACGATA AGCGTGGGGA ATGGCCGGCG
GTGCTCTCGG GAGGGCAGAA GCAGCGGGTC GCGTTGGCCC GCGCCCTGGT CAGCCGCCCC
CGCGTGCTCG CCTTCGACGA GCCCCTCGGC GCCCTTGACG CCCTGACGCG CATCGCCATG
CAGCGTCTGC TCGAACAGGT GTGGCAGGCC CAGGGCTTCA CCGCCATCCT GGTGACGCAT
GACGTCGCCG AGGCAGTTGC ACTTGCCGAT CGCGTACTGG TGATCGAGGA CGGCCGCATC
GCCAAGGACC TGCCGATCGA TCTGCCGCGC CCCCGCCAGC GCGGCTCCGC CGAGCTCGCC
GCACTCGAAG GTGAGATCCT AAGAGATCTG CTGAAGGGCG CGGAGGACAC ATTCGAGCTG
TGA
|
|---|
| Protein sequence | MMEALQFLLA APPGAYDPVA RTIEDEPRPS QPPTSALALD IRGLRKSFGD NDVLRGIDLH
IPAGQFVTIV GRSGCGKSTL LRLIAGLETP TAGHIVFGED KLPGDVRVMF QEPRLLPWAR
VLANVEVGLG TERNSPDARA RADAALIEVG LDDKRGEWPA VLSGGQKQRV ALARALVSRP
RVLAFDEPLG ALDALTRIAM QRLLEQVWQA QGFTAILVTH DVAEAVALAD RVLVIEDGRI
AKDLPIDLPR PRQRGSAELA ALEGEILRDL LKGAEDTFEL
|
|---|
| |