| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2879 |
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| Symbol | |
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| ID | 6410548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3141012 |
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| End bp | 3141965 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642712759 |
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| Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
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| Protein accession | YP_001991862 |
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| Protein GI | 192291257 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTCGT CGCGTAGATC GTTGTTCGCC CTTGCCTTCG CCGCGCTCGC GGCATCGTCC
ATCGGCTTCG CCTCTGCGGC GGACCTGAAG GAAGTCCGCA TCGGCTTCCA GAAAGCTGGC
ATTCAGCCTG CCGTGAAGGA ACGCGGCGTC CTCGAAGCGG CGCTGAAGGA AAAAGGCCTT
TCCGTGAAGT GGGTCGAGTT CGCCTTCGGG CCGCCGCTGC TCGAAGCGCT CAACACCGGC
AATATCGATT TCGGTTACAC CGGCGACACC CCGCCGATCT TTGCGCAGGC CGCAGCGGCC
AACCTGCTGT ACGTTGCCGC CCTGCCCGGC TCCGGCAAGA ACGAAGGAAT CGTCGTTCCC
GCGAACTCGC CGATCAAGTC GGTCGCCGAT CTCAAAGGCA AGCGGCTCGC TATTCCGAAA
GGATCGAGCG CGCATAACAC CGCAGTCGCC ATTCTCGAAA AGGCAGGCCT GCAGTTCACC
GACGTGACCG CGGTGTACCT GCCGCCTGCC GATGGCACCG CGGCTTTCGC CGGCGGAACG
GTAGACGCGT GGGCGATCTG GGATCCGTAC CTCGCACTGG CCGAGAAGAG CGGCGCCCGC
GTGCTGAGCT TCGCCGGCGA CGCCCACGAC TCGATCGGCT TCTTCCTTGC CAACCGCGAA
TTCACCAATG CCCATGGCAA CCTCGTCGCC TTGTTGAACC AGACTTTCGC CAAGGAAGCG
CAGTGGGCAA ACGGCCATCG CGACGAGATC ACCAAATCCC TCGCCGCCTC GACCGGCGTC
GATCCCGCCG TGGTCAGCAC TCTGGTCGGG CGATCGGTGT TTGAGGTCAC GCCGGTCACC
GACAAGATTC TGGCGGAGCA GCAACAGACA GCGGACCGGT TCCACAAGCT CGGCCTGATC
CCGAAACCGA TCAACGTCCG CGACATCGTC TGGAAGTGGT CGCCGGCGTC CTGA
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| Protein sequence | MMSSRRSLFA LAFAALAASS IGFASAADLK EVRIGFQKAG IQPAVKERGV LEAALKEKGL
SVKWVEFAFG PPLLEALNTG NIDFGYTGDT PPIFAQAAAA NLLYVAALPG SGKNEGIVVP
ANSPIKSVAD LKGKRLAIPK GSSAHNTAVA ILEKAGLQFT DVTAVYLPPA DGTAAFAGGT
VDAWAIWDPY LALAEKSGAR VLSFAGDAHD SIGFFLANRE FTNAHGNLVA LLNQTFAKEA
QWANGHRDEI TKSLAASTGV DPAVVSTLVG RSVFEVTPVT DKILAEQQQT ADRFHKLGLI
PKPINVRDIV WKWSPAS
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