Gene Rpal_2877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_2877 
Symbol 
ID6410546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp3139825 
End bp3140448 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content64% 
IMG OID642712757 
Producttranscriptional regulator, XRE family 
Protein accessionYP_001991860 
Protein GI192291255 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG CCAGCTTCCG GCTCGAATCC CACGAAACCG AAGCGAAGCA CGTGTCAGTC 
GATCTGCCGT CCATCGTCGG GCACAATCTG CGGCGGCTTC GGGTCCGGCA GGGTTACTCG 
CTTGAACGTC TGGCTAAGCA ATCCGGCGTC AGCCGTGCGA TGCTTGGGCA GATCGAGACC 
GGCAAGAGCG TGCCGACGAT CGGAACCTTG TGGAAGGTCG CGACCGCGCT CGGCGTTCCG 
TTCGCGCGCC TGATCGCGAC GGAGACCCCC CACCATCCCC AGGTGCTGCG CCGGACTGAT 
GCGAAACTGC TGACGTCGAA CCAAGGGCAG TTCACCTCGC GCGCGCTGTT TCCGTTCGAC 
GGCGAGCGCC AGGTCGAATT CTACGAACTG CGGCTGGCAC CGCTTCATCG CGAGGACGCC 
GATCCGCACG CCGCCGGCAC CCGCGAAAAT CTGGTCGTTG CGAAAGGTGC CGTCGAAATC 
ACCGCAGGCG CGGAACGGCC CGTGGTACTC AGCGCCGGCG ACGCGATCCT GTTCGACGCA 
GATGTCCCGC ACAGCTATCG CAATCTCGGC GCCGAGGAAG CCGTTCTGTT CCTCGTCATG 
ACCTACGTCG AGTCGATCGG ATAG
 
Protein sequence
MSDASFRLES HETEAKHVSV DLPSIVGHNL RRLRVRQGYS LERLAKQSGV SRAMLGQIET 
GKSVPTIGTL WKVATALGVP FARLIATETP HHPQVLRRTD AKLLTSNQGQ FTSRALFPFD 
GERQVEFYEL RLAPLHREDA DPHAAGTREN LVVAKGAVEI TAGAERPVVL SAGDAILFDA 
DVPHSYRNLG AEEAVLFLVM TYVESIG