| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2876 |
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| Symbol | tgt |
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| ID | 6410545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3137614 |
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| End bp | 3138747 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642712756 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001991859 |
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| Protein GI | 192291254 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTGC CCAATCACTT CGAACTCATC GGGACCGACG GCGCCGCACG CACCGGTAGG
CTCACCACTC CGCATGGCGT CGTCCGTACG CCGGCCTTCA TGCCGGTCGG CACCGCAGGC
GCGATGAAGG GCCTGCATTG GCGCGAAGTG CGCGACGCCG GCGCCGATAT CGTACTCGGC
AACACCTATC ACCTGATGCT GCGACCCGGC GCCGAGCGGA TCGCCGCGCT CGGCGGATTG
CAGCGCTTCA CCACCTGGAA CGGTCCGATG CTCACCGACT CCGGTGGCTT CCAGGTGATG
TCGCTGGCGC AGCTGCGCAA AGTCAACGAA CAGGCGGTGA CGTTCCGCTC GCATATCGAC
GGCGCGGCGA TCGAATTGTC GCCGGAGCGT GCGATCGAAG TGCAGCGTCT GCTCGGCTCC
GACATCGCGA TGCAGCTCGA CGAGTGCGTG CGGCTGCCGG CCGATCGCGC CGATATCGAG
CGGGCGATGC AGTTGTCGCT GCGCTGGGCC GAGCGCTGCA AGCGCGCGTT CGAAACCGCG
CCGGACGGTT ACATGCTGTT CGGCATCGTG CAGGGCGGCG ACGTGCCGGA GCTGCGCCAC
GCCTCGGCAC AGGGATTGAT CGACATCGGC TTCCACGGCT ATGCGATCGG CGGCCTTGCG
GTCGGCGAGC CGCAGGACGT GATGCTGGCG ATGATCGAGG AGGCGGCGCC GATCCTGCCC
GCCGAGCGGC CGCGCTATCT GATGGGCGTA GGCACGCCGG AGGACATGCT GGAGGCGGTG
GCGCGCGGCA TCGACATGTT CGACTGCGTG ATGCCGACCC GCAATGGCCG CCATGGCCTG
GCGTTCACGC AATACGGCCC GATCAACCTG CGCAACGCCA AGCACGCCGA CGATCCGCGG
CCGCTCGACG AGGAGAGCGA CTGGCCGTCG GCCCGCACTT ACTCGCGGGC CTATCTGCAC
CATCTGGTGC GGTCGAGCGA GACGCTCGGC GCGATGCTGT TGTCGGAGAT CAACATCGCC
TACTATCAAC GGCTGATGCG CGACATCCGC GCCGCGATCG CCGCAGGTCA GTTCGAAGAG
TTCAGGCTTC GTACCCGCGC CGCCTGGGAG CGGGGCGACA TCGCGCCGCG CTGA
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| Protein sequence | MTVPNHFELI GTDGAARTGR LTTPHGVVRT PAFMPVGTAG AMKGLHWREV RDAGADIVLG
NTYHLMLRPG AERIAALGGL QRFTTWNGPM LTDSGGFQVM SLAQLRKVNE QAVTFRSHID
GAAIELSPER AIEVQRLLGS DIAMQLDECV RLPADRADIE RAMQLSLRWA ERCKRAFETA
PDGYMLFGIV QGGDVPELRH ASAQGLIDIG FHGYAIGGLA VGEPQDVMLA MIEEAAPILP
AERPRYLMGV GTPEDMLEAV ARGIDMFDCV MPTRNGRHGL AFTQYGPINL RNAKHADDPR
PLDEESDWPS ARTYSRAYLH HLVRSSETLG AMLLSEINIA YYQRLMRDIR AAIAAGQFEE
FRLRTRAAWE RGDIAPR
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