Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_2867 |
Symbol | hfq |
ID | 6410536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3129024 |
End bp | 3129272 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642712747 |
Product | RNA-binding protein Hfq |
Protein accession | YP_001991850 |
Protein GI | 192291245 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.648341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCAG ACCGCGCACA AAACCTTCAA GACACTTTCC TCAACCACGT ACGCAAGACG AAAACTCCCC TGACGATCTT CTTGGTCAAC GGGGTGAAGT TGCAGGGTAT TGTCACCTGG TTCGATAATT TTTGCCTTTT GTTGCGGCGC GACGGTCATT CGCAGCTCGT CTACAAACAC GCGATCTCGA CGATCATGCC GGGGGCGCCG ATCCAGCTGT TCGAAAGCGG CGAGGACTCG CCAGCTTGA
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Protein sequence | MAADRAQNLQ DTFLNHVRKT KTPLTIFLVN GVKLQGIVTW FDNFCLLLRR DGHSQLVYKH AISTIMPGAP IQLFESGEDS PA
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