| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2842 |
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| Symbol | |
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| ID | 6410509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3095389 |
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| End bp | 3096756 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642712720 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001991825 |
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| Protein GI | 192291220 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.416467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTTTA AGCCCGATGC GAAGGATACG TCCGGCGCCG GGCCCGGGCG TAAAGGATGG
GGCGGGCTGC TGCGGCGACG CAGCGTCTCG CTCTTACTGG TCGCGCTGAT CCTCGGCGGG
CTCGGCTTCG TGGCCTGGCG CGCGGTCCAG ACCAAGCAGG CCGAGCGGCG GATGCCGCCC
GACCTTGCGG TGCCGGTGCT GGCAGCGACG CCGAAGGTTG CCGATGTGCC GGTGTATCTC
GACGGCGTCG GCTCGGTGAA GCCGCTCGCC ACCGTGACGG TGCGTGCCCA GGTCGACGGC
AAGCTGATCG CGGTGAATTT CACCGAGGGG CAGGACGTCA AGGCTGGTGA CGTGCTGGCA
GAGATCGATC CGGCGATCTA TCAGGCGCAG TACGATCAGG CCGTCGCCAA GAAGGCGCAG
GACGAAGCGC AGCTCGCCAA CGCCCGGATC GACCTGGCGC GCTATCAGCA GCTCGCCGCC
TCGAATGCCG GTTCCAAGCA GCAGGCCGAC ACCCAGAAGG CGACGGTGGC GCAGCTCGAG
GCGCAGGTGC GGTCGGATCA AGCCGCGATC GACAACGCCG CGGCGACGCT GAGCTACACC
AAGGTGGTGG CGCCGATCTC GGGCCGTGCT GGCCTGCGCC AGGTCGACAA GGGCAACATC
GTGCACGCCT CCGACACCAC CGGCATCGTG GTGCTGACGC AGTTGCAGCC GATCGCGGTG
CAGTTCAGTC TGCCGCAGCA ACAGATTGTC CGGGTCAATG CAGCGGCCGC AGGTGCACCG
CTGCGGGTCG ACGTGTTCGG CAATGACGGC GTCACCGTTG TCGATACCGG CACGCTGAAG
GGCATCGACA ATCAGGTCGA CCAGACCACG GGCACGGTGA AGCTCAAGGC CGAATTCCCC
AACGCAAAGA TGCAGCTCTG GCCGGGCCAG TTCGTCAACG TCCGGCTCAA GGTCGACACA
TTGAAGCAGG CGATTGTCGT GCCGGTCTCG GCCGTGCAGC GCGGGCCGGC CGGAACGTTC
AGCTACATCA TTGGCGAGGA CAACATCGTT CATGCCAGTC CGGTGAAGGT GACGCAGCAG
AACGAAAGCG AGGCCGTGGT CGCCGAGGGG CTGACGCCGG CCGACCGGGT CGTGACCACC
GGCTTTGCCA ATCTGGCCGA AGGCGCCAAG GTGACGATCG GCGATGCCAG CCAGACGCCG
ACCGCCGATC TCGCGCCGCA GAAGCGACGC CGTCCGCCAG GTGCTCAGGG CCAGAGCGGC
GGCGAAGCCG GCGAGGGGCA GGGTAAGCGT CGCCGCGGTG AAGGCGGGCA GCAGCAGGCG
CCGGCCGCCG GCGGAACTCC GTCGTCGGGT GCGCCCAAGG CGCCCTGA
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| Protein sequence | MLFKPDAKDT SGAGPGRKGW GGLLRRRSVS LLLVALILGG LGFVAWRAVQ TKQAERRMPP
DLAVPVLAAT PKVADVPVYL DGVGSVKPLA TVTVRAQVDG KLIAVNFTEG QDVKAGDVLA
EIDPAIYQAQ YDQAVAKKAQ DEAQLANARI DLARYQQLAA SNAGSKQQAD TQKATVAQLE
AQVRSDQAAI DNAAATLSYT KVVAPISGRA GLRQVDKGNI VHASDTTGIV VLTQLQPIAV
QFSLPQQQIV RVNAAAAGAP LRVDVFGNDG VTVVDTGTLK GIDNQVDQTT GTVKLKAEFP
NAKMQLWPGQ FVNVRLKVDT LKQAIVVPVS AVQRGPAGTF SYIIGEDNIV HASPVKVTQQ
NESEAVVAEG LTPADRVVTT GFANLAEGAK VTIGDASQTP TADLAPQKRR RPPGAQGQSG
GEAGEGQGKR RRGEGGQQQA PAAGGTPSSG APKAP
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