| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2834 |
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| Symbol | |
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| ID | 6410501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3086218 |
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| End bp | 3087723 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642712712 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001991817 |
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| Protein GI | 192291212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGC TCGGATCCGT GACGCCCGTG TTCGTGCGCG GCGAGATGGT GCCGCAGCGG
CCGCCGCCGG TGCATACCCC TGGCGTGCTT GGTCTGGTGC GCCAACGGCT GTTGAACTCG
CCGACCAATA TCCTGCTGAC GATCGTCGGT CTGCTGCTGC TGTATTTCAC TGTGGTGCCG
ACGGTGAAGT TCCTGCTGGT CGATGCGGTG TGGTCCGGTT CGAACCGCAC CGACTGCCTC
GCCGACAAGG CCGGCCATCC GGTCGGCGCC TGCTGGCCAT TCGTGCAGGC CAAATTCTCG
CAATTCATCT ACGGCTTCTA TCCGACGCCG GAACGCTGGC GGGTCGATCT GGTGTTCGCG
CTCGGCGCGC TGCTGCTGTT GCCGCTGCTG ATCCCGCGCG CGCCGGCCAA GACGCTGAAT
GCCGGCCTGT TCTTCATCGC CTTTCCGGTG CTGGCGTTCT TCCTGCTGCA CGGCGGCGGC
GTCCAGGGCT TCGGCGTCAC CTGGAGTGCG GACCTGCTGA GCGGTGTTGC CGACAGCGTC
GGCCGCGCCG GCCGCAAGCT CGCCGCGGGC GGGGCGATCG GCAGCGTGAT CGGTCAGGTG
CTGCTCGGCC TCGGCACCGT GTTGGTGTGG CTGAGCTGGC CGCTGGTGGC GCTGCGCGAC
TGGATCCAGG CCTCGTCGCA GCCGGTGTGG CTCGATCTTC TGATCACCGC GATCGTCGTC
ACCGCGCTGG TGTTCGTGCT GACCGGTGTG CGCAATGGCT GGCGCGCGCT GGCGACGACG
GTCGGCATGT TTGCCGGCAT CGCGGTGATG GTCGCGGCGC TGCGGCTTGA CCGCGGCGGC
CTCCCGGTCG TCGATACCCG GATGTGGGGC GGCCTGCTGG TGACGCTGGT GGTGTCGGTC
ACCGGCATCG TCGCCTCGAT GCCGATCGGG ATTGCGCTGG CGCTCGGCCG CCGCTCGACG
ATCCCGCTGA TCCGGATCTT CTCGGTCGCC TTTATCGAGT TCTGGCGCGG CGTGCCGCTG
ATCACGGTGA TGTTCTTCGC CACCTACATG CTGCCGCTGT TCCTGCCGGG CAACTTTACG
ATCGACAATC TGATGCGGGT GCTGATCGGC ATCGCGCTGT TCGCCGGCGC CTACAATGCC
GAGGTCATTC GCGGCGGTCT GAATGCGATC CCGCGCGGGC AGGCGGAGGC GGCAAGCGCG
CTCGGGCTGT CGTATTGGAA GATCACCGGG CTGATCGTGC TGCCGCAGGC GCTGCGCCAC
GTCATTCCGG GCCTGGTCAA CAGCTTCATC GCGCTGTTCA AGGACACCTC GCTGGTGTCG
ATCGTCGCGC TGTTCGATCT GCTCGGCCAG CTCCGCGCCG CGTTTGCCGA TCCGACCTGG
TCGACGCCGA CGACGCTGTT CACCGGCTTC GCGTTCACCG GGCTGATCTA CTTCGTGTTC
TGCTTCGGGA TGTCGCGCTA TTCGCTGTCG GTCGAACATC GGCTCAACGC GCACCGGCGG
ACCTGA
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| Protein sequence | MSELGSVTPV FVRGEMVPQR PPPVHTPGVL GLVRQRLLNS PTNILLTIVG LLLLYFTVVP
TVKFLLVDAV WSGSNRTDCL ADKAGHPVGA CWPFVQAKFS QFIYGFYPTP ERWRVDLVFA
LGALLLLPLL IPRAPAKTLN AGLFFIAFPV LAFFLLHGGG VQGFGVTWSA DLLSGVADSV
GRAGRKLAAG GAIGSVIGQV LLGLGTVLVW LSWPLVALRD WIQASSQPVW LDLLITAIVV
TALVFVLTGV RNGWRALATT VGMFAGIAVM VAALRLDRGG LPVVDTRMWG GLLVTLVVSV
TGIVASMPIG IALALGRRST IPLIRIFSVA FIEFWRGVPL ITVMFFATYM LPLFLPGNFT
IDNLMRVLIG IALFAGAYNA EVIRGGLNAI PRGQAEAASA LGLSYWKITG LIVLPQALRH
VIPGLVNSFI ALFKDTSLVS IVALFDLLGQ LRAAFADPTW STPTTLFTGF AFTGLIYFVF
CFGMSRYSLS VEHRLNAHRR T
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