| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_2833 |
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| Symbol | |
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| ID | 6410500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3085016 |
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| End bp | 3086221 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642712711 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001991816 |
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| Protein GI | 192291211 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.18237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATCG ACGCACGCCC ACCGCCGCCG CAGCTCGTCG CGAAACTGCG ACGAGCGCTC
GGTGGTCGCT CAGGCTGGAA GGGGCTGCTC GCCCAAGTGC TGTTCGTCGC GGCGCTGTTC
TGGATCGGCT ACGAGATCGT CGATAACGCC CGCGACAACC TTGCCAACCA GCGGATCGCC
TCGGGCTTCG CCTTCATGTC GCACACGGCG GGATTCGGCG TCAGTCAGAC GCTGATCCCG
TATCAGGAGT CCGACAGCTA CACCCGCGTT TTCCTGGTCG GCCTGATCAA CACGCTTGTG
GTGTCGGTCG TCGGCATCTT CTTCGCCACC GTGATCGGGT TCGCGGTCGC GCTGGCGCGG
CTGTCGCCGA ACTGGCTGAT CTCGCGGATC GGCGGCGGCT ATGTTGAAAT CGTCCGCAAC
CTGCCGCTGC TGTTCCAGAT CCTGTTCTGG TACCTGGCCG TGCTCGGCTC GCTGCCGTCA
CCGCGCCAGA GCATCTCGGT GATGGACAGC TTCTTCCTGT CCAACCGGGG CATCGTGGTG
CCGCGGCTGG CCGGCGAGGC GGGGCTCGAT GGTTTCCTGG TCGCGCTCCT GATCGCTGTC
GCGGCCGCGA TCGTATTGCC GCTGTACGCC CGGCGCCGGC TGTTTGCGAC CGGCAAGCCG
ATGCGGGTAT GGCCCTGGGT ACTCGGTCTG CTGATCGGAT TGCCGCTGAT CGCATTCCTG
ATTGTCGGCA AGCCGTTTTC GCTGGAAGTG CCGGTGCTGC GCGGCTTCAA TTTCGTCGGC
GGTTCGCGGA TCGCGCCGGA ATTCGTCGCC CTGACGCTGG CGCTGTCGAC CTACACGGCC
GCGTTCATCG CCGAAGTCGT CCGCGCCGGC ATTTTGTCGG TACACAAGGG GCAGATGGAG
GCGGGGGCCT CGCTCGGCCT GTCGCGCGGG CAGACTCTGC GGCTGATCGT GATCCCGCAG
GCCATGCGGG TGATCCTGCC GCCGCTGACC AACCAGTATC TGAACCTGAC CAAGAACTCC
TCGCTGGCGG TGGCGATCGG CTATCCCGAC CTGTTCTCGG TGTTCGCCGG TACCACTCTG
AGCCAGACCG GCCAGGCGAT CGAGGTGATC GCGATCACCA TGGGCGTGTA TCTGCTGATC
TCGCTGGTCA CCAGCGCGCT GATGAGCCTG TACGGGTGGC GGATCAACCG GAGCATGGGC
GCATGA
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| Protein sequence | MAIDARPPPP QLVAKLRRAL GGRSGWKGLL AQVLFVAALF WIGYEIVDNA RDNLANQRIA
SGFAFMSHTA GFGVSQTLIP YQESDSYTRV FLVGLINTLV VSVVGIFFAT VIGFAVALAR
LSPNWLISRI GGGYVEIVRN LPLLFQILFW YLAVLGSLPS PRQSISVMDS FFLSNRGIVV
PRLAGEAGLD GFLVALLIAV AAAIVLPLYA RRRLFATGKP MRVWPWVLGL LIGLPLIAFL
IVGKPFSLEV PVLRGFNFVG GSRIAPEFVA LTLALSTYTA AFIAEVVRAG ILSVHKGQME
AGASLGLSRG QTLRLIVIPQ AMRVILPPLT NQYLNLTKNS SLAVAIGYPD LFSVFAGTTL
SQTGQAIEVI AITMGVYLLI SLVTSALMSL YGWRINRSMG A
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